Setaria viridis (green foxtail): 117863579
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Entry
117863579 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117863579
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117863579
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
DUF7885
LRR_4
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_8
LRR_At5g56370
F-box_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
117863579
NCBI-ProteinID:
XP_034603261
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Position
1:complement(31830687..31833351)
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AA seq
417 aa
AA seq
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MSAPPLGGGGALINEVLTDDELRTVLTRLGPEAERDAFGLVCRRWLRIQSSERRRLRARA
GPDMLRRLAARFPGVLELDLSQNPSRSFYPGVIDDDLDVIAGSFRNLRILALQNCKGISD
VGVAKLGDGLPSLQSLDVSRCIKLSDRGLKAVALGCQKLRQLHITGCKLITDNLLIVLSK
SCLQLEDLGAAGCNSITDAGISALADGCHHIKLLDISKCNKVGDPGVCEIAEVSSSHLVS
IKLLDCSKVGDKSIYSLAKFCHNLETLVIGGCRNISDSSIQALALACSSSLRSLRMDWCL
KITDTSLRCLLSNCKLLVAIDVGCCDQITDIAFQDGEGSGFQSELRVLKISSCVQLTVAG
VSSVIKSFKALEYLDVRSCPQVTRDSCEQAGVQFPSACKVNFYGSLLESDPSAERFF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgccaccgttgggcggcggcggcgccctcattaacgaggtgctcaccgacgat
gagctccgcacggtgctcacccgtctggggcccgaggcggagcgcgacgccttcgggctc
gtgtgccgccgatggctccggatccagagctccgagcggcggcgcctgcgcgcgcgcgcc
gggccggacatgctgcgccgcctcgccgcgcgcttcccgggagtcctcgagcttgacctc
tcccagaatccctcgcgctccttctaccccggggtcatcgacgatgacctcgacgtcatt
gccgggagcttccgcaacctgcgtatcctggcgctgcagaactgcaaaggtatctctgat
gttggagttgccaaattgggagatggactgccatctctgcagtcccttgatgtttctcgc
tgcataaagctgagcgatagaggtttgaaggcggttgcactagggtgccaaaaattgagg
cagctgcatatcacgggttgcaaattaataactgataatttattgattgttctatcaaag
agctgtctacaattggaagatcttggagctgcaggatgtaacagcataacagatgccggt
atatctgctctagctgatggctgtcatcatataaaattgcttgacataagtaaatgcaat
aaagttggtgatcctggagtctgtgaaatcgctgaggtttcttcatcacacttggtgtca
ataaagcttttggactgcagcaaggtgggagataagtccatctattctttagctaagttc
tgccataacctagagactcttgtcattggtggatgtcggaacattagcgattcatccata
caagctcttgctcttgcctgctccagcagcttaaggagcctgagaatggactggtgcttg
aaaataacagacacgtcattgcgatgcctgctgtctaactgtaaacttcttgtggcgatt
gatgttgggtgctgtgaccaaataaccgacattgcatttcaggacggggaaggaagtggg
tttcagtctgaactgagagttttgaagatcagcagctgtgttcagctcacagttgcaggg
gtcagcagtgtgattaaatccttcaaggctcttgagtacctggatgttcggtcatgtcct
caggttacaagggacagttgcgagcaagctggagtacagtttcctagtgcctgtaaggtg
aatttctatggcagcttgctggagtccgatccatctgctgagaggttcttctag
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