Setaria viridis (green foxtail): 117863932
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Entry
117863932 CDS
T07951
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117863932
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117863932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
AAA_18
nSTAND3
Cytidylate_kin
AAA_14
AAA_5
NPHP3_N
Viral_helicase1
NACHT
AAA_30
AAA_2
RuvB_N
RNA_helicase
AAA_28
TIP49
ATPase_2
DUF815
TsaE
AAA_17
ABC_tran
AAA_11
AAA_24
AAA_33
AAA_7
Rad17
nSTAND6
nSTAND1
IstB_IS21
bpMoxR
AAA_19
AAA_3
PduV-EutP
SLFN-g3_helicase
Cytidylate_kin2
KAP_NTPase
SRPRB
NB-ARC
Sigma54_activat
DnaB_C
Mg_chelatase
SKI
NTPase_1
ResIII
Motif
Other DBs
NCBI-GeneID:
117863932
NCBI-ProteinID:
XP_034603737
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Position
7:22055356..22060072
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AA seq
481 aa
AA seq
DB search
MSAPMEISFSAPPPPPPPPPDAACTVVAAPSLVPAAAVSSSPPLPPQQQAEAAVVAPSPA
DEKVLVSVEVLLHATSAARHEDVQVAVERMLEARSLSYVDGPVPIPADNSYLLENVKRIQ
ICDTDEWVENHKVLLFWQVKPVVHVFQLSEDGPGEEPGEDDTLSSFNEWALPAKEFDGLW
ESLLYEVGLKQRLLRYAASALLFTERCVDPYLVSWNRIVLLHGPPGTGKTSLCKALAQKL
SIRFKSRYSMCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVES
LAAARQAAISGSEPSDSIRVVNALLTQMDKLKSWPNVIILTTSNITTAIDIAFVDRADIK
AYVGPPTLQARYEILRSCIQELLRVGILTYPQGGSVPCILNYSTLKEKKHCPEAVEPHGA
LHLSSLLYEAAELCEGLSGRSLRKLPFLAHASVANPSRCDASTFMHTLIQTAQREILESR
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccctatggagatctccttctccgcgcccccgcccccgcccccgccccctccg
gacgccgcatgcaccgtggtggccgccccgtcgctggtgcctgccgccgcggtctcctcc
tcgccgccgttgccaccgcagcagcaggcggaggcggccgtggttgctccttccccggcc
gacgaaaaggtcctcgtctcagttgaggtactgctgcacgccacgagcgcggctcgccac
gaagacgtccaggtggcggtcgagaggatgctagaagctcgaagcttaagctatgttgat
gggcctgtgccgattcctgctgataattcttatcttcttgaaaatgtcaaaaggatccaa
atctgtgacactgatgagtgggttgaaaatcacaaagttctcttattttggcaagtcaag
cctgttgtgcatgtgttccagctgagtgaagatggtcctggtgaggaaccaggtgaggat
gatacactctcaagcttcaacgagtgggccttgcctgccaaagaatttgatggtttgtgg
gaaagcttactgtatgaagttggtctcaagcagaggttgttgagatatgctgccagtgct
ttgctttttactgaaagatgtgtggacccatatctggtttcatggaaccggattgtactc
ttgcatggtccacctggaacagggaagacctccttgtgtaaagcactagcacagaaactt
tctattcgcttcaaatcaaggtattctatgtgtcaattgattgaagtgaacgctcattca
ttgttcagcaagtggttttctgaaagtggaaaactggtagccaaacttttccagaagatc
caggagatggtggaggaagaaagcaacttggtatttgtattgatagatgaagttgaaagc
cttgctgctgccagacaagctgccatatctggctctgaaccttcagactccattagagtt
gtgaatgcgctgctaacacaaatggacaaactgaagtcctggccaaatgttatcattttg
acaacatcaaatatcacaacagcgattgatattgcgtttgttgacagggcagacattaag
gcatatgttggaccccctacgcttcaagcacgatacgagatcttgaggtcatgcatacag
gaacttttaagagttggtattcttacatatcctcagggtggtagtgtgccatgtattctg
aactattcaacactgaaggagaagaagcactgtcctgaggctgtagaaccccatggcgcg
cttcatctctcgagtttactctatgaagctgcagaattgtgcgagggacttagcggacgg
tcattgagaaaactcccttttctggcacatgcctctgtcgccaacccttcgcgctgcgat
gcttctactttcatgcatacattgatacaaactgcacaaagagagatcttggagtcgcgt
ggttag
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