Setaria viridis (green foxtail): 117866417
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Entry
117866417 CDS
T07951
Name
(RefSeq) adagio-like protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117866417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117866417
Ubiquitin system [BR:
svs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117866417
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
PAS
PAS_3
NANM
F-box-like
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
117866417
NCBI-ProteinID:
XP_034606512
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Position
8:complement(28854731..28858601)
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AA seq
636 aa
AA seq
DB search
MFDDEGAGDRGVVAVKRMRLWEVEDEVEGEEGMEVDGEEEEEEEEEEEGWAWGAPAAGVG
VGVGMGEQRAAAIVVADAAEADFPVIYVNAAFEAATGYRAHEVLGRNCRFLQFRDPRAQR
RHPLVDPMVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGSVTHVIGIQ
LFSEANIDLSNISYPVYKQQSNHRPTIQDLNSASHEHTPKIQSSDYCGILQLSDEVLAHN
ILSRLSPRDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVKLEMSTKMLRWGRLAR
ELTTLEAASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLEAPT
PEWRRVKVSASPPGRWGHTLSWLNGSWLVVFGGCGQRGLLNDVFVLDLDAQQPTWREVAS
EGPPLPRSWHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWREIPTSWSPPSR
LGHTMSVYGTTKLFMYGGLAKSGSLRLRSSDAYTLDVGEDSPQWRQLATTGFPNVGPPPR
LDHVAVSLPCGRIIIFGGSIAGLHSPAQLFLIDPAEEKPAWRILNVPGQPPKFAWGHSTC
VVGGTRVLVLGGHTGEEWILNELHELCLASRPDEDE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgacgagggggcgggggatcggggcgtggtagcggtgaagcggatgaggctg
tgggaggtggaggacgaggtggaaggggaggaggggatggaggtagacggggaggaggag
gaggaggaggaggaggaggaggaggggtgggcgtggggtgcgccggcggcgggggtgggg
gtgggggtggggatgggggagcagagggcggcggcgatcgtggtggcggacgcggcggag
gccgacttccccgtcatctacgtcaacgccgccttcgaggccgccactgggtaccgcgcc
cacgaggtgctcggacgcaactgccgattcctgcaatttcgggatccacgtgcacaaagg
cgacatccccttgttgatcccatggttgtttcagagattcggcgatgcctcaatgagggg
attgaattccaaggcgagctgctcaatttccggaaggatggtgctccactttacaacaga
ttaaggctcattcctatgcatggggatgatggctctgtgactcatgttattggaatccag
ctattctctgaggcaaacattgatctcagcaatatatcatatccagtgtataaacaacag
tccaaccacaggcccactattcaagatctgaactcagcttctcatgaacatactcccaaa
atccagagctcagattactgtggtatcctccaattgtcagacgaagttcttgcacacaac
atcttatctcgcctatcaccaagagatgtagcatcgattggatcagtctgtaccagaatg
catgaactaaccaagaacgatcacctgaggaagatggtctgccagaatgcatggggaaga
gatgtcactgtaaagcttgagatgagcaccaagatgttacgatggggtcgccttgcaaga
gagctaacaacccttgaggcagcatcatggaggaagttcacagttggaggacgtgtggag
ccttcccgttgcaacttcagtgcatgtgctgttggtaatcgccttgtcctgtttggaggg
gagggagtcaacatgcagccaatggatgacacgtttgtgcttaacttggaggctccaact
ccagaatggcgccgtgtcaaggtctctgcctccccacctggccgatggggacacactcta
tcatggctgaatgggtcatggctggtagtatttggaggctgtggacagcgaggtttgctc
aatgatgtcttcgtccttgacctcgatgctcagcagcctacgtggagggaggttgcaagt
gagggtcctccactgccacggtcttggcacagctcatgcactttggatggttcaaagctt
gttgtctcaggtgggtgcacagagtccggtgttcttctcagcgacaccttccttcttgac
ctcacaaaggaaaaaccagcatggagggaaattcctacatcctggtcaccgccatcccgc
cttggccacaccatgtctgtctacggtacgaccaaactattcatgtatggtggactggca
aagagcggctcgctccggcttcgctccagtgacgcatacaccctggatgttggtgaagac
agtccccagtggaggcagctggcaacgaccgggttcccaaatgtcggcccaccgccaagg
cttgaccacgtcgctgtgagcctgccatgtgggagaatcatcatatttggcggctcgatt
gctggtctgcactccccggcgcagctgttcctgattgaccctgccgaggagaaaccggca
tggaggatcctgaacgtccccgggcagccaccgaagttcgcctggggacacagtacatgt
gtggtgggtgggacaagggtcctggttctgggaggccacaccggggaggagtggatcctg
aacgagctccatgagctgtgtctcgcaagcaggcccgatgaagacgagtga
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