Streptomyces violaceoruber: B1H20_04220
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Entry
B1H20_04220 CDS
T05124
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu00900
Terpenoid backbone biosynthesis
svu01100
Metabolic pathways
svu01110
Biosynthesis of secondary metabolites
Module
svu_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
B1H20_04220
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
svu01006
]
B1H20_04220
Enzymes [BR:
svu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
B1H20_04220
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
B1H20_04220
2.5.1.29 geranylgeranyl diphosphate synthase
B1H20_04220
Prenyltransferases [BR:
svu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
B1H20_04220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ARF60684
UniProt:
A0A1V0U622
LinkDB
All DBs
Position
complement(966664..967926)
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AA seq
420 aa
AA seq
DB search
MGLSLPADHAFAASVHPDVDRTASADPGPSAEEARAVDHDVPGGLQRMAEAVLAERVAEA
AEHDPVFADEVARRVADFTLRGGKRMRSRLLWWAMRACGAADTAAALRLGVGLELIQTCA
LIQDDVMDRSPTRRGRPAVHIALAERLGLPAGSGPGGAFGASAAVLAGDLALVWADDTVA
ETCLPPSRRRRITAVWRAMRGEMIAGQYLDLRGQAVGAASATTALRTARLKSALYTVERP
LALGAALAGADRRTTDELRAAGRYAGTAFQLRDDLLGAFGDPAVTGKPSGDDIRDGKPTY
LLAVARARADAAGDRRAPAVLDRAVGDPGLGDDDLAEVRSVLEATGARAHVEDRARRLGE
RAAHHLARAVDVEAHAGGRLLDLLAAVAGSRAAPPPGPGSAHPPYRETAAPAPAVAEGGR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggcctctcgctgcccgcagaccacgcgttcgccgcatccgtgcacccggacgtggac
cggacggcgtccgcggaccccggcccctccgccgaggaggcgcgggccgtcgaccacgat
gtgcccggcggcctccagcggatggccgaggccgtcctggcggagcgggtcgcggaggcc
gccgagcacgatccggtcttcgccgacgaggtggcgcgccgggtcgcggacttcacgctg
cgcggcggcaagcggatgaggtcccgcctgctctggtgggccatgcgcgcctgcggcgcg
gccgacaccgccgccgcgttgcggctcggcgtcggcctggagctgatccagacctgcgcg
ctcatccaggacgacgtgatggaccggtcgcccacacggcggggcaggcccgccgtccac
atcgccctggccgagcgcctgggcctcccggccggctccgggccgggcggggcgttcggc
gcctccgccgccgtgctcgccggggacctcgccctggtgtgggccgacgacacggtcgcc
gagacgtgcctgccgccctcccggcggcggcggatcaccgcggtgtggcgggccatgcgg
ggcgagatgatcgccggacagtacctggacctgcgcggccaggccgtcggcgccgcttcc
gcgacgaccgcgctgcgcaccgcccgcctcaagagcgcgctgtacacggtggaacggccc
ctggcgctcggagcggccctcgccggggcggaccggcggaccaccgacgaactgcgcgcg
gccggccggtacgccggaacggccttccaactgcgcgacgacctgctcggcgccttcggc
gatccggcggtcaccggcaagccctccggggacgacatccgcgacggcaagcccacctac
ctgctggcggtcgcccgcgcccgcgccgacgccgccggcgaccgccgcgccccggccgtg
ctggaccgcgccgtgggcgaccccggcctcggcgacgacgacctcgcggaggtccgctcc
gtcctggaggccaccggcgcccgcgcccacgtcgaggaccgggcgcggcggctgggggag
cgggccgcgcaccacctggcgcgggcggtcgacgtcgaggcgcacgcgggcggccggctg
ctggacctgctggccgccgtcgcgggaagccgcgccgccccgccgcccggccccggctcc
gcccaccccccgtaccgagagaccgcggcgcccgccccggccgtggccgaaggaggccga
tga
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