Shewanella woodyi: Swoo_3940
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Entry
Swoo_3940 CDS
T00676
Name
(GenBank) SMP-30/Gluconolaconase/LRE domain protein
KO
K01053
gluconolactonase [EC:
3.1.1.17
]
Organism
swd
Shewanella woodyi
Pathway
swd00030
Pentose phosphate pathway
swd00053
Ascorbate and aldarate metabolism
swd00930
Caprolactam degradation
swd01100
Metabolic pathways
swd01110
Biosynthesis of secondary metabolites
swd01120
Microbial metabolism in diverse environments
swd01200
Carbon metabolism
swd01220
Degradation of aromatic compounds
swd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Swoo_3940
00053 Ascorbate and aldarate metabolism
Swoo_3940
09111 Xenobiotics biodegradation and metabolism
00930 Caprolactam degradation
Swoo_3940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swd04147
]
Swoo_3940
Enzymes [BR:
swd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.17 gluconolactonase
Swoo_3940
Exosome [BR:
swd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Swoo_3940
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SGL
Vgb_lyase
Arylesterase
DUF6923
TrAA12
Lactonase
Tricorn_2nd
Str_synth
Motif
Other DBs
NCBI-ProteinID:
ACA88197
UniProt:
B1KFM2
LinkDB
All DBs
Position
complement(4804163..4805050)
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AA seq
295 aa
AA seq
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MKGVSFLSCIALLLLSPMGTLLADQRHSEDWVKDQVFTSGVEGPAVNSKGELFAVNFAKE
GTIGKVTAQHKASHFMTLPEGSVGNGIRFDKQDNMYIADYAGHNILRVDAGTEVAYVFSH
QPKMNQPNDIAMMDSGILFASDPNWSNSSGQLWRIDTDGVTQLLESDMGTTNGVEVSPDN
KRLYVNESVQRKVWVYDLNMQGEISNKRLLIEFADHGLDGMRTDIHGNLYIARYGAGVVA
VVSASGELLEEIRLKGQHPTNVAFGGEDGHSLFITMQKRGAIEHVRVKYAGRTFM
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcgtcagttttctaagctgcatagcattgttgttattgagtccaatgggcaca
ctcttagcggatcaacgtcatagtgaagactgggttaaagatcaggtttttacttctggt
gttgaggggccagcagtaaatagcaagggggagctatttgcggttaatttcgccaaagag
gggacaataggcaaggtgacggctcagcacaaagcttcacactttatgactttacccgaa
ggctcagtgggtaatgggatccgctttgataaacaagataatatgtatatagccgattat
gcgggccataacattctaagagtggacgctggcactgaggtcgcttacgttttctcccat
cagccaaagatgaatcaacctaatgatattgcaatgatggattcaggtattctctttgcc
agtgatcctaattggtcgaatagttctggtcagttatggcgtattgacaccgatggagtg
actcaactgttagagtctgacatgggcacaacaaatggtgttgaagtgagcccagataat
aaaaggctctatgtgaatgaaagtgttcaacgaaaagtctgggtgtatgatctaaatatg
caaggtgagatcagcaataaacgcttgttgattgagtttgcagatcatggcttggatgga
atgcgcaccgatatccacggcaatttatacattgcccgttatggagccggtgttgttgct
gttgtctctgcgagtggcgaactgcttgaagagatcagacttaagggacagcatccgact
aatgtcgcatttggtggagaggatggacatagcttgtttatcacgatgcaaaaacgtggg
gctatagaacatgttcgtgttaaatatgccggtagaacttttatgtga
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