Shewanella woodyi: Swoo_4582
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Entry
Swoo_4582 CDS
T00676
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
swd
Shewanella woodyi
Pathway
swd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Swoo_4582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swd03021
]
Swoo_4582
03400 DNA repair and recombination proteins [BR:
swd03400
]
Swoo_4582
Enzymes [BR:
swd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Swoo_4582
Transcription machinery [BR:
swd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Swoo_4582
DNA repair and recombination proteins [BR:
swd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Swoo_4582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ACA88832
UniProt:
B1KLV2
LinkDB
All DBs
Position
5553465..5553749
Genome browser
AA seq
94 aa
AA seq
DB search
MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEENDKPTVIALREIELGLVT
ADTLDADERQTVREREAAEIAAVAAIAEGRNNVI
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagacgccgtagaacaaatcggcaaccgttttgatatgatc
ctggttgcagcgcgtcgtgctcgccaaatcgccgtgcagggcaaagaccctatggttgaa
gaagagaacgacaagccaacggttatcgctttacgcgaaatcgaacttggtttagtcaca
gcagatactctggacgcagatgagcgccagactgttcgtgaacgtgaggcggctgaaata
gctgctgttgctgcgattgctgaaggtcgtaacaacgtaatctaa
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