Formicincola oecophyllae: E3E12_04895
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Entry
E3E12_04895 CDS
T06093
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
swf
Formicincola oecophyllae
Pathway
swf03030
DNA replication
swf03430
Mismatch repair
swf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E3E12_04895
03430 Mismatch repair
E3E12_04895
03440 Homologous recombination
E3E12_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swf03032
]
E3E12_04895
03400 DNA repair and recombination proteins [BR:
swf03400
]
E3E12_04895
Enzymes [BR:
swf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E3E12_04895
DNA replication proteins [BR:
swf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E3E12_04895
DNA repair and recombination proteins [BR:
swf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E3E12_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DUF3646
AAA
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_19
AAA_16
AAA_14
AAA_18
TIP49
ResIII
DUF815
AAA_24
nSTAND3
AAA_assoc_2
SRP54
DEAD
TsaE
PIF1
NTPase_1
SKI
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QDH13635
UniProt:
A0A4Y6UBZ3
LinkDB
All DBs
Position
1107078..1109210
Genome browser
AA seq
710 aa
AA seq
DB search
MMDENNDMPLPPVTDGGFLSPAPSAARQGEGAGQSAYRVLARTYRPRVLDDLIGQENLVR
VLERAFETGRVAHAFMLTGVRGVGKTTTARILARALNCTGADGTGHATAAPCGVCPNCTA
ILAGNHPDVLEIDAASRTGVNDIREVIEATQYRPIQGRMKVFIIDEVHMLSTAAFNALLK
TLEEPPPQVTFVFATTELRKIPVTVLSRCQRFDLRRVPQAMLVEHYGRIAAKEGANLAPE
ALNLIARAADGSVRDGLSLLDQAIAQGASDAPSVAAMLGQADRAMVFDLLEAMLEGQGAR
TLALAEQAWSHGIAPEALMADLLEATHSVSRLRAVPALRQDETLPELERERGSTLADKHP
MGVLARTWQILLKGAEEIAQAPQGENAAEMVFIRLLHASQLPTPERILARLAKQENQQNQ
NLPSSPAPHQGAGVSRAPVQGGLGTAPLKGAQQPVPQTVSEQGSAPQAFQGSLQGPGAAA
TMPPSQARFGSVRLEGGAERVPAPMCWADDSPEEPAAKLARPTKRDTIPLPRSWREMVRF
TSLCHEPWLHGILRCEAHMVRFADHGAAPWCVSVRLDDKAVRQRALKLLSERLEEYYPGQ
WHILPSDGEGEPTLEAQGAEVIALHHAAAGRHPLVRAILKRFPGARMGTVRDTEPEGGQD
AGAENAFTLLGAGESAGGTFQGQPYESPFALDEDSYGAYPFNEDGDMVEE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgatggatgaaaacaacgacatgcccctgccccccgtcacggatggtggcttcctctcc
cccgctccctctgctgcacgccagggggaaggtgctgggcaaagcgcttaccgcgttctg
gcgcgcacgtaccgtccgcgcgtccttgatgacctgatcggccaggagaacctggtgcgt
gtgcttgagcgcgcctttgaaacaggccgcgtggctcatgccttcatgctgacgggcgtg
cgcggggtgggcaaaaccaccacagcacgcattctggcccgcgccctcaactgtacaggg
gcagacgggaccggccatgccacagcggccccttgtggcgtttgccctaactgcacggcc
atcctggctggcaaccacccagacgtcttggagattgacgctgcctcgcgaactggcgtc
aacgacatcagggaagtcattgaggccacccaatacaggcccattcaaggacgcatgaag
gttttcatcattgatgaggtccacatgctctccacagcggcgttcaatgcgctgctcaag
acgctggaggaaccaccgccgcaggtgacgttcgtgttcgccaccacagaattgcggaaa
atccccgtcaccgttttgtcgcgctgccagcgttttgacctgcgccgagtgccccaggcc
atgcttgttgagcattacgggcgcatcgccgccaaggaaggtgccaacctggcgccagag
gccctcaacctcatcgcacgtgccgctgatggatccgtccgtgatggactgtccctcctc
gaccaggccatagcccagggggcttctgacgcgccaagcgtggcagccatgctgggccag
gctgacagggccatggtgtttgaccttcttgaagccatgctggaggggcaaggggcccgc
accctggcattggctgaacaggcctggagccacggcatcgccccagaggccctcatggca
gatttgcttgaggccacgcattctgtctcgcgtttgcgcgccgtgccagctttgcgccag
gacgagacgttgcctgaactggagcgtgagcgcggcagtactttagcagacaagcacccg
atgggcgttctggcccgcacgtggcagattttgctcaaaggcgctgaagagatcgcccaa
gccccccagggggaaaacgcggcggagatggtgttcatccgcctgctccatgccagccag
ctgcccacgccagagcgcatcctggcgcgcctggccaagcaggaaaaccaacaaaaccag
aacctcccctcctctcctgcgccccatcaaggggctggggtttcaagggctcccgttcag
ggtggattgggaactgcgcctttgaagggcgcccagcaaccagtcccccaaacggtttct
gaacagggttccgccccccaggccttccaaggcagcttgcaggggccgggtgcagcggca
actatgcctccaagccaggcgcgctttgggtctgtgcgcctggaagggggggctgaacgc
gttccagcccccatgtgttgggcagacgacagcccagaggaacctgctgcaaagctggcc
cgccctactaagcgtgacaccattcccctgccgcgcagctggcgtgaaatggtgcgcttc
accagcctttgccatgagccttggttgcacggcatcctgcgttgcgaagcccatatggtg
cgctttgccgaccatggggcagccccctggtgcgtcagcgtgcggcttgacgacaaggct
gttaggcaacgcgccctcaaattgctttcagaacggcttgaggaatactacccaggccaa
tggcacatcctcccttctgacggtgaaggtgaacccaccttggaggcgcagggcgcggag
gtcattgcgcttcaccacgcggccgctgggcgccaccccctggtgagggccattttgaag
cgtttccccggggcacgcatgggcacggtgcgcgatacggagccagaagggggacaggac
gctggcgctgagaacgccttcaccctgctgggtgctggggaaagcgctggcggcactttt
caaggccagccctatgagagcccctttgccctggatgaggatagttacggcgcctatccc
ttcaatgaggatggggacatggtcgaggagtga
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