Syntrophomonas wolfei: Swol_2304
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Entry
Swol_2304 CDS
T00396
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Swol_2304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swo03021
]
Swol_2304
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_2304
Enzymes [BR:
swo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Swol_2304
Transcription machinery [BR:
swo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Swol_2304
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Swol_2304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
DAHP_snth_FXD
HHH_XRCC3_RpoA
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABI69595
UniProt:
Q0AUK9
LinkDB
All DBs
Position
complement(2650112..2651062)
Genome browser
AA seq
316 aa
AA seq
DB search
MLEMEKPRIDCVEKNSSSNYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDG
VLHEFSTIPGVLEDTTEIILNIKKLVLSYTGSERKIIRLEQQGPKEVKASDITPDAEVEI
LNPDLHLASLDEDGKVEIEMTVERGRGYVSSDQQPQKNDDIVGLIPIDSIFTPVSRVNYT
VENARVGKRTDYDRLNLEVWTNGSISPEEAISLSAQILIEYLKLFTEIDDTYAEVEILVE
KEEEKKDKILEMSIEELELSVRASNGLKRASINTVGDLIAKNREEMSKIRNLGQKSLEEI
ERKLKELNLSFRKSED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgctggagatggaaaaaccacgtatagattgtgtggaaaagaattctagcagcaattat
ggaagatttgttatcgaacccctggaaagaggatatggtactactctagggaattcacta
cgccgagtcctgctttcttctttgccgggagctgcagttacatccataaaaattgatgga
gtacttcatgagttttccaccatacccggtgtattggaagatactaccgagattattctt
aacatcaaaaaactggtcttaagttataccggcagcgagcgtaaaattattcgtttggaa
cagcagggaccaaaggaagtaaaggcttccgatattacacctgatgctgaagttgagata
ctgaatccggatttgcatctggccagtctggatgaagacggaaaagtagaaatcgaaatg
acggtggagcggggtcggggttatgtaagttctgatcagcagccacagaaaaatgatgat
attgtgggcttgattcccatagattccatatttacaccagtgagccgggtcaattatacg
gtagagaacgcccgggtgggaaaaaggacggactatgatcgtctgaacctggaagtatgg
accaatggcagtataagcccggaggaagctatcagcctttctgcacaaattttaattgaa
tacttaaaactcttcacggaaatagatgatacctatgccgaggtagaaatcctggtggaa
aaggaagaggaaaagaaagacaagattctggagatgtccatagaggaactggagctttca
gtaagagcatccaacggcctaaaaagagccagtattaatacggtgggagatttgattgcc
aaaaaccgtgaggaaatgagcaagataagaaatctgggccaaaaatcactggaggaaatt
gaaagaaagcttaaggaattaaacctgtcgtttaggaagtcagaagattag
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