KEGG   Staphylococcus xylosus SMQ-121: SXYLSMQ121_1497
Entry
SXYLSMQ121_1497   CDS       T03311                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
sxl  Staphylococcus xylosus SMQ-121
Pathway
sxl02024  Quorum sensing
sxl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sxl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SXYLSMQ121_1497
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SXYLSMQ121_1497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sxl03019]
    SXYLSMQ121_1497
   03036 Chromosome and associated proteins [BR:sxl03036]
    SXYLSMQ121_1497
Messenger RNA biogenesis [BR:sxl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SXYLSMQ121_1497
Chromosome and associated proteins [BR:sxl03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SXYLSMQ121_1497
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: AID42928
UniProt: A0A5R9B4X4
LinkDB
Position
complement(1619242..1619466)
AA seq 74 aa
MNTSENIQDKFLGQFKADQTKVVVFLVNGFQMKGIIEDYDKYLVCLLSQGKQHLIYKHAI
STFTIDDSNTNEEV
NT seq 225 nt   +upstreamnt  +downstreamnt
atgaatacatcagagaacatccaagataaattccttgggcaatttaaggctgatcagaca
aaggtagttgtgtttttagtaaatggttttcaaatgaaaggtattatcgaagattatgat
aagtatttagtatgcttattatcacaaggtaagcaacatttaatttacaaacatgcgatt
agtacatttacgattgacgattcaaacactaatgaggaagtataa

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