Shewanella xiamenensis: MKD32_15630
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Entry
MKD32_15630 CDS
T08228
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm03030
DNA replication
sxm03430
Mismatch repair
sxm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKD32_15630 (holA)
03430 Mismatch repair
MKD32_15630 (holA)
03440 Homologous recombination
MKD32_15630 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxm03032
]
MKD32_15630 (holA)
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_15630 (holA)
Enzymes [BR:
sxm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKD32_15630 (holA)
DNA replication proteins [BR:
sxm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKD32_15630 (holA)
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKD32_15630 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UML92848
LinkDB
All DBs
Position
3545182..3546213
Genome browser
AA seq
343 aa
AA seq
DB search
MRVYPDQLSRHLNPLHACYLIFGDDPWLLETSKDQIRQAAKRQGFEERVQLIQETGFNWG
NLTQEWQSMSLFSSRRIIELTLPNAKPGADGSAALQALLQTPNPDVLLILEGPKLASEQT
NSKWFKTLDSLGIYLPCTTPEGDQFRRWLDSRITHFKLNLQPDARAMLYTLYEGNLLAAD
QAMQLLQLLSPSQPIGADELSHYFEDQSRFTVFQLTDALLNNRQDSAQHMLAQLNGEGTA
MPILLWALFKELQLLLSLKSEQAQGSPLNSLFGKHRIWDKRKPLYQTALQRLSLTQIEHM
LAFASKLELNLKQLGHEDWTGLSHLCLLFDPKAHSHLAHISLD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtttatcctgatcaactctcccgccatctcaatccgcttcacgcttgttacctg
atttttggtgatgatccttggttgctcgaaacctccaaggatcagatccgccaagccgcc
aaacgccaagggtttgaagagcgcgttcagttaattcaagaaacaggttttaactggggt
aacttgacccaggaatggcagtccatgagcctgttttctagccggcgcatcattgagcta
actctccccaacgcaaaacccggtgcagatggttcggcggcgctacaagcgttactgcaa
acgccgaatcccgatgtgttgctgatccttgaaggcccaaaactcgccagcgagcagacc
aatagcaagtggttcaaaaccttagatagcttaggaatttatttaccctgcactacgcca
gagggcgaccaattcagacgttggctcgactcacgcattacgcactttaagctgaattta
caacccgatgcgcgcgctatgttgtacacactctacgaagggaatttactcgccgccgat
caggccatgcagttgctacaactgttaagcccaagccagcctatcggtgccgacgaatta
agccattactttgaagatcaatcccgctttaccgtgtttcagctcaccgatgcactgctg
aataatcgccaagacagtgctcagcatatgcttgcccaactcaacggtgagggtacggcc
atgccgattttactttgggctttatttaaagagctgcaattactactcagcctaaagagt
gaacaggcgcaaggttcgccgctcaatagcctctttggtaagcatcgaatttgggataag
cgtaaaccgctataccagaccgctttgcaacgcttaagcctcacccaaatcgaacatatg
ctcgcctttgcgtccaagctagaattgaacttaaagcaattaggccatgaagattggaca
gggctcagccacctgtgcttattattcgatcctaaagcccacagtcatctagcccatatc
agcttagattaa
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