Shewanella xiamenensis: MKD32_20355
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Entry
MKD32_20355 CDS
T08228
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00540
Lipopolysaccharide biosynthesis
sxm01100
Metabolic pathways
Module
sxm_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
MKD32_20355 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sxm01005
]
MKD32_20355 (waaA)
Enzymes [BR:
sxm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
MKD32_20355 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
MKD32_20355 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
MKD32_20355 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
MKD32_20355 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
sxm01005
]
Lipid A
MKD32_20355 (waaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_1_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
UML93730
LinkDB
All DBs
Position
complement(4644838..4646112)
Genome browser
AA seq
424 aa
AA seq
DB search
MNRFFYSVLLYLLSPLLIVYLAFRAIKSPDYRGRWGERFGLAQLKPTDLLIHSVSMGETL
AAIPLIRLIMQMHPELSITVTTTSPTGSAEVRKAFGEQVQHCYLPFDLPWCVSRFLRQLS
PKWCIIMETELWPNLVALAAKRGVRLMLANARLSAKSAAQYAKRSQLSRPMLQRLDVIAV
QTQAEAQRFIDLGVPADRVTVCGSLKFDLSITPERLTLARALRQTWGRETAPVWVAGSVH
PGEFDAMLSAHKRLLAKWPEALLIIAPRHPEQFAAVAEVAASQGFEYVRRSDAQAITATT
QVLVGDTMGELLTFYGAADQAFVGGTLIENGGHNPLEPAAMGVPVMVGPNHWDFAQITQM
LADAGGLRIVSSGQELGDNLIQYFEQPILRQQAAEAGLAVVEANRGALQRQFALAESLLM
HQTA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatttttttatagtgtgttgctttatcttttatcccctctactcattgtctat
ttggcttttagagctattaaaagtccagactatcgtggccgttggggcgaacgctttgga
ttagcccaacttaaaccgacggatttactgatccattcggtgtccatgggggaaacgctc
gcggctattcccttgatccgtttgattatgcaaatgcaccctgagctaagcattacggtt
actaccaccagtcccactggctctgccgaggtacgcaaagcctttggtgaacaagtgcag
cactgctatttacccttcgatttgccttggtgtgtgagccgttttctgcgccagttgtcc
cctaaatggtgcatcataatggaaactgagttatggccgaatctggtggctctggcggct
aagcgcggcgtgcgcttgatgctcgccaatgctaggctgtcggctaaatcggcggcgcag
tatgccaagcgttcgcaattaagtcgtcccatgttgcaacgcttagatgtgattgcggtg
cagacccaagccgaagcgcagcgatttatcgaccttggagtgcccgctgacagagtgact
gtttgcggcagtttgaagtttgatttgagtattacgcccgagcgcttaaccctagcacga
gcgctacgacaaacttgggggcgtgagacggcgcccgtatgggtagcaggtagtgtccac
cccggtgagtttgatgccatgttaagtgcccataaacggttgctcgctaagtggccggag
gcgctgctgatcattgcgccgcgtcacccagagcagtttgcggcggtggcggaggttgcc
gctagccaaggttttgaatatgtgcgccgcagtgatgctcaagcaattactgccacgacg
caggtgctggtgggcgataccatgggtgaactattaaccttttatggcgcggccgatcaa
gcctttgtgggaggtactttgattgaaaatggcggccataatcccctcgaacccgctgcc
atgggcgtgccagtaatggtagggccaaaccattgggattttgcccaaattacccaaatg
ttggcagatgcgggtggcttgcggattgtgagttcagggcaagagttgggggataattta
attcagtattttgagcagccgattttacgccaacaagccgctgaagcaggccttgccgtg
gtagaagccaatcgtggtgctttgcagcgtcagtttgctctcgccgaatcgttactcatg
caccaaacagcctag
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