Synechococcus sp. CC9605: Syncc9605_0968
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Entry
Syncc9605_0968 CDS
T00292
Name
(GenBank) ATPase
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
syd
Synechococcus sp. CC9605
Pathway
syd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Syncc9605_0968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syd02000
]
Syncc9605_0968
Transporters [BR:
syd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Syncc9605_0968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_21
AAA_29
DUF87
DEAD
AAA
AAA_5
AAA_30
AAA_23
FtsK_SpoIIIE
bpMoxR
MMR_HSR1
APS_kinase
Zeta_toxin
Mg_chelatase
nSTAND3
DUF815
ORC-CDC6-like
AAA_7
TsaE
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABB34726
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Position
922899..924677
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AA seq
592 aa
AA seq
DB search
MGAVADWRRVRRLGRYLVRDRRRLLVALLLLLPLAFAGALQPVLLGQAVSVLRGEPSLPW
LSGLSLSASIRVIIWLYFGSVLLRFALQGVQQFSILAVGQRLTARIRDDLFEHALSLSLR
FHDRMPVGKLLTRLTSDVDALAEVFGSGAVGVLNDLVSLLVLASTMLFIEWRLGLLLLFT
QVPVTLAVLWLQRRYRKSNYRVREELSQLNADFQENLQGLEVVQMYGRETVNSARFLRTG
RDYRSAVNGTIFYDSSISAFLEWVALAAIALVLALGGLMVTNGAMGLGTLTTFILASQRL
FDPLRQLAERFTQIQGGLTAVERIGELMEEPLEIAEAKNVLPHLSGGGGEVIFENVSFAY
RPDDPILRNLSFRIAPGEHVALVGPTGSGKSTIIRLLCRLYEPQQGRILLDGRDIRTIPM
ADLRRELGVVLQDTFLFSGNVADNLRLSASVSDGELAQVCAELGLNELLSKLPKGLETKL
RERGGNLSSGERQLLAVARVAIRQPTVLVMDEATAFMDPSTEATLQADLDRVLQKRTAIV
IAHRLATVEASDRILVLGRGELIEQGTHQELRARGGLYAQLAELQERGLARL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgtcgccgactggcgccgggtccgtcgtctcggccgttacctcgtgcgggat
cgccggcggcttttggtcgccctgctgctcttgcttcctttggcctttgcgggagcactc
cagcccgttctattggggcaggctgtcagcgttctgcgcggagagcccagtcttccctgg
ttgtcggggttgagcctgtccgcttcgatccgcgtgatcatctggctctacttcggctcg
gtgttgctgcggttcgccctgcagggcgtgcagcaattcagcatcctcgccgtcggacaa
cggctcaccgcccgcatccgcgacgacctgtttgaacatgcgttgtcgctgtccctgcgt
ttccacgaccgcatgccggtgggcaagttgctcacacggctcaccagcgatgtggatgcc
ctggctgaggtgtttggcagtggtgccgtgggggtgctcaatgatctggtgagcctgctg
gtgctggcctcaacgatgctgttcattgagtggaggctggggctgctgctgttgttcaca
caggtgcccgtcaccttggccgtgctttggctgcagcgccgttaccggaagtccaactac
cgcgtacgggaagagctctcccagctcaatgctgatttccaggagaacctccaaggcctt
gaggtggtgcagatgtacggccgtgaaacggtcaacagcgcccgtttcctgcgtacgggc
agggactaccgcagcgctgtgaatggcaccatcttttacgacagcagcatttcagccttc
ttggaatgggtggccctggccgccattgccctggttctggcccttggcggcttgatggtg
accaatggtgcgatgggcttgggcaccctcaccaccttcatcctggcctcccagcgtctg
ttcgaccctttgcgtcagttggccgagcgtttcacccagattcagggtgggctgacggcc
gtcgaacgcattggcgaattgatggaggagcccctcgagattgccgaggccaagaacgtc
cttcctcacctgagcggcggaggcggcgaggtgatcttcgagaacgtgagctttgcgtac
cggccggatgacccgatcctccgcaacctgtccttccgtatcgcccccggcgagcatgtc
gccctggtgggccccacgggttccggcaaaagcacgatcatccgtctgctctgccgcctc
tatgaaccacagcagggacgcattcttctcgatggacgggacatccgaacgatccccatg
gcggatctccggcgtgagctgggcgtcgtgcttcaggacacgtttctgttcagcggcaat
gtggccgacaatctccggctcagtgcttcggtgagcgacggtgagttggctcaggtctgt
gctgagctcggcctcaacgagctgctctcgaagcttcccaagggtctggagacgaagctg
cgcgagcggggaggcaacctctcctcaggtgaacgccaactgctggcggtggccagggtg
gcgatccgccagccaacggtgttggtgatggatgaagccaccgccttcatggacccttca
acggaggcgacgctccaagccgatctcgaccgggtcctgcaaaagcgcaccgccattgtc
atcgcccaccgcctggccacggtggaggcctcggatcgcatccttgtgctgggccgcggc
gaactgattgaacagggcacccatcaagagctcagggcccgcggtgggctttatgcccag
ctcgctgagctgcaggaacgggggttggcgcgtctgtga
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