Sediminicola sp. YIK13: SB49_11085
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Entry
SB49_11085 CDS
T04145
Name
(GenBank) lycopene cyclase
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
syi
Sediminicola sp. YIK13
Pathway
syi00906
Carotenoid biosynthesis
syi01100
Metabolic pathways
syi01110
Biosynthesis of secondary metabolites
Module
syi_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
SB49_11085
Enzymes [BR:
syi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
SB49_11085
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_3
NAD_binding_8
HI0933_like
Pyr_redox_2
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
ALM08284
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Position
2481893..2483035
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AA seq
380 aa
AA seq
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MATYDYIIIGAGAGGLMLAEALGKDPFFKEKSILLLDKDSKNNNDRTWCFWENGTGDFDT
ILHKTWNHIYFGGPTYDAKLNIAPYSYKMIRGIDFYSSYKAKIAAHPNITFKTDRVLHIE
DLNREVLVKTENSTYSAKKVFNSILDYKVLKTQTKYPLLQQHFIGWFVKTEKPVFDLDQA
TFMDFSIPQKGNTRFMYVLPFSETEALVEYTLFSEKLLPEAEYEEAIASYLKEKLQCGTY
SIIEKEKGNIPMTCFDFNVFNSKNLLHIGMAGGWAKPSSGYTFRYAWKKTKLLVSFLKED
RPLYKFTKKDRFWYYDLLLLDILANDNSKGELIFGQLFKNRSPQLIFKFLDEETTLWEEL
KIITACPIPDFTKALLRRLF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatatgactacattattattggggccggagcaggcggattaatgcttgccgaa
gcattggggaaggatccattttttaaagaaaaatccatcttattgttggataaagactcc
aaaaacaataatgacaggacttggtgcttttgggagaacggcacaggagattttgatacc
atcctgcacaaaacatggaaccacatctattttggtggcccaacctatgacgcaaaatta
aacattgctccatattcctataaaatgatcaggggtattgatttttactcctcttataag
gccaaaatagctgctcatcccaatataaccttcaaaacggatagggtgctgcacattgaa
gacttgaatagggaagttttggttaagactgaaaatagcacttattctgcgaaaaaggta
tttaacagtatcttggattacaaggtcttgaaaacacagaccaaataccctttattacag
cagcactttattggctggttcgtaaaaacggaaaaacccgtttttgatttggaccaggct
acctttatggatttctccattccccaaaaagggaatacccgctttatgtacgttttaccg
ttttcagaaaccgaagccttggtggagtataccctattttccgaaaaattgcttcctgaa
gccgaatatgaggaggccattgcttcctatttaaaggaaaaattacaatgtggaacgtat
tcaattatagaaaaagaaaaaggaaacataccaatgacctgtttcgattttaatgtcttt
aacagcaagaaccttctccatataggcatggccggtggatgggcaaaacccagttctggg
tacacatttagatacgcctggaaaaagaccaagctcttggtttccttcttaaaagaggac
agaccactatataaattcacaaagaaggatagattttggtattatgacctgcttttactg
gatatcctagctaatgacaatagcaaaggagaattaattttcggacagctttttaaaaat
agatctccacaactaatttttaaatttcttgatgaagaaacaaccttatgggaggaacta
aaaattattacggcatgccccattcccgactttaccaaagccctattaagaaggttgttt
taa
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