Synechococcus sp. NB0720_010: LY254_12920
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Entry
LY254_12920 CDS
T10498
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LY254_12920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syno02000
]
LY254_12920
Transporters [BR:
syno02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LY254_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
DEAD
AAA_21
AAA
AAA_5
DUF87
AAA_30
AAA_29
Zeta_toxin
AAA_23
ORC-CDC6-like
SRP54
nSTAND3
TsaE
AAA_19
AAA_7
FtsK_SpoIIIE
TrwB_AAD_bind
Mg_chelatase
AAA_18
cobW
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPH90138
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Position
2404758..2406557
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AA seq
599 aa
AA seq
DB search
MAKRDRQRLLRLLPYLGRDRKRLLLTLVLLIPVAGAAAVQPLLVGQAISALRQEPVLPWL
QAMPLSGQLRTLVSLLLVAVLIRLGLQGVQSFNVQAVGQRLTARIRNDLFAHSLDLSLRF
HDRTPVGKLLTRLTSDVDALAEVFGSGAVGLLADLVTLLVIAGTMVAIEPRLGVLLLSVQ
VPVTLTMLWLQKRYRKANYRVREELSQMNADLQENLQGLEVVQMFRRESHNSARFARTAD
AYRNAVNGTIFYDSSISALIEWVSLGAISLVLALGGWMVTAGAMGLGTLTTFILYSQRLF
DPLRQLAERFTQIQGGLTAVERIGELLEEPIEIQELPLNQRSSAAIRSGSDFSSAGEVIF
ENVSFAYRPDDPILTDLSFRIAPGEHVALVGPTGSGKTTIIRLLCRLYEPQQGRILLDGV
DIRELPIPTLRQRLGVVLQDTFLFSGNVADNLRLDGAISDVELERLCSELGLEPLLDRLP
SGLATELRERGSNLSSGERQLLSVARVAIRNPSVLVMDEATAFLDPSTEATLQRDLDRVL
RQRTAIVIAHRLATVEAAHRILVLKRGRLIEEGTHTALRAAGGLYAQLADLQERGLARL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcgatcgtcaacggctgctgcgtcttctgccctacctcgggcgcgatcgc
aaacggttgctgctcaccctggtgctgctgatcccggtggcgggtgccgctgcggttcaa
cccctgctggtcggacaggcgatttcggccctgcgtcaggagccggtgctgccctggctg
caggccatgcccctctcgggccagttgcggaccctggtgtcgctcttgctggtggcggtc
ctgatccgcctgggtctgcagggtgtccagagcttcaacgtgcaagccgttggccaacgt
ctgaccgcgcggatccgcaacgacctgtttgcccattcgctcgacctctcgctgcgcttc
cacgaccgcacgcccgttggcaagttgctgacgcgcctgaccagtgacgtcgatgccctg
gccgaggtctttggcagtggcgccgtggggctgctggcggacctggtcaccctcttggtg
atcgccgggacgatggtggcgattgaaccgcgcctcggggtgttgctgctgtcggtgcag
gtgccagtcaccttgaccatgctctggttgcagaagcgctatcgcaaggccaactaccgg
gtccgcgaggagctctcccagatgaacgcggatttgcaggagaaccttcagggtctggag
gttgtgcagatgttccgccgggagtcccacaactccgcccgctttgcccgcaccgctgat
gcctaccgcaatgcggtcaacggcacgatcttttacgactcctcgatctcggcgttgatc
gagtgggtgtccctgggggcgatttccctggtgctggccctggggggctggatggtcacc
gctggggcgatgggcctgggcaccctgacgaccttcatcctctattcccagcgtctgttt
gatcccctgcgccagttggcggagcgcttcactcagatccaaggcggcctgaccgctgtt
gagcgcatcggtgagctgctggaggagcccattgagattcaggagctgcccctaaaccag
cgctcctcggccgccattcgcagtggcagcgacttcagcagcgccggtgaggtgattttt
gaaaacgtctccttcgcctaccgcccggacgatccgatcctgacggacctctccttccgg
attgctcctggggagcacgtggccttggtcggtccgaccggatcgggcaagaccaccatc
atccgcctgctctgccgcctctatgaaccccagcagggccggatcctgctggatggcgtg
gacatccgagagttgcccatccccaccctgcgccagcgcctcggggtggtgctgcaggac
accttcctgttcagcggcaacgtggccgacaacctgcgcctcgatggcgccatcagcgat
gtcgagctcgagcgcctctgctcggagctgggtcttgagcccctgctcgatcgactgcct
tcggggctggctacagagctgcgcgagcgcggcagcaacctctcctccggtgagcgccag
ttgctctcggtggcgcgggtggcgatccgcaatccctcggtcttggtgatggacgaggcc
acggccttcctggacccgtccaccgaggccaccctgcagcgggatctcgatcgggttctg
cgccaacggacggccatcgtcatcgcccaccgcctggccacggtggaggcagcccaccgc
atcctggtgctcaagcgcggtcgcctgatcgaagagggaacccacacggccctgcgcgca
gccggtggtctctatgcccagttggccgaccttcaagaacgcggtctggccaggctctag
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