Synechococcus sp. KORDI-49: KR49_09305
Help
Entry
KR49_09305 CDS
T03345
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR49_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_09305
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KR49_09305
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KR49_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
AAA_25
P-loop_SecA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AII46639
UniProt:
A0A076HGC2
LinkDB
All DBs
Position
1685015..1687054
Genome browser
AA seq
679 aa
AA seq
DB search
MPAFDLTAPYSPKGDQPTAIQQLVKGVNGGERYQTLLGATGTGKTFTMANVIAKTGRPAL
VLAHNKTLAAQLCNELREFFPENAVEYFISYYDYYQPEAYVPVSDTYIAKTASINEEIDM
LRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAVKFEVGETLNVRRQLRELVDNQY
SRNDVEIARGRFRIKGDVLEIGPAYEDRLVRIELFGDEVEAIRYVDPTTGEILQSIDAVN
IYPAKHFVTPKDRLESAIGAIRSELRERLEVLNAEGKLLEAQRLEQRTKYDLEMLGQVGY
CNGVENYARHLAGREEGSPPECLIDYFPKDWLLIVDESHVTCSQLQAMYNGDQARKKVLI
EHGFRLPSAADNRPLKGEEFWEKASQTVFVSATPGNWELEVSGEQVAQQVIRPTGVLDPI
VEVRPTTGQVDDLLGEIRDRAAKQQRVLVTTLTKRMAEDLTDYLAENEVRVRYLHSEIHS
IERIEIIQDLRLGEYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRA
ARHVEGVALLYADNLTDSMAKAISETERRRAIQQAYNEKHGVVPTAAGKKASNSILSFLE
LSRKLKQDGPDADLVQVAGKAAKALEEDPDAGMALEALPELIEQLEGKMKEAAKKLDFED
AANLRDRIKQLRQKMAGKV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccttcgatctcacggcgccttactcccccaagggggatcagccgacggcgatc
cagcagctggtgaaaggcgtcaacggcggcgagcgttatcagaccctgctgggagccacc
ggcacgggcaagaccttcacgatggcgaatgtgatcgccaagaccggacgaccggcgctg
gtgctcgctcacaacaagacgctggccgcgcagctgtgcaatgagctgcgggagttcttc
cccgagaacgccgtcgaatacttcatctcgtactacgactactaccagccggaggcctac
gttccggtcagcgacacctacatcgccaagaccgcgtcgatcaacgaggagatcgacatg
ctgcgtcactcggcgacccgatccctgttcgaacgccgcgacgtgatcgtggtggcctcg
atcagctgcatctacggcctgggcatccccagtgaatacctcaaggccgcggtgaagttc
gaggtgggggaaacgctcaatgtgcgccgtcagctgcgcgagctggtggacaaccagtac
agccgtaacgatgtggagatcgcccgggggcgtttccggatcaagggggacgtgttggag
atcggcccggcctacgaagaccggctggtgcgcatcgagctgttcggcgacgaggtggag
gcgatccgctacgtggaccccaccaccggtgagatcctccagagcatcgatgcggtgaac
atctaccccgccaagcacttcgtgacgcccaaggatcgtctcgagtcggcgatcggcgcc
atccgcagcgaactgcgggagcggctggaggtgctcaatgccgagggcaagctgctggag
gcccagcgcctggagcagcgcaccaagtacgacctggagatgctggggcaggtgggttac
tgcaacggcgtggagaactacgcccgtcatctggccggccgggaggagggttctccgccg
gagtgcctgatcgattacttccccaaggactggctgctgatcgtggacgagagccacgtc
acctgttcgcagctgcaggcgatgtacaacggcgatcaggcccgcaagaaggtgctgatc
gagcacggcttccgcctccccagcgctgccgacaaccggccgctgaagggggaggagttc
tgggagaaggccagtcagaccgtgtttgtgagtgccaccccgggcaactgggagctggag
gtgagcggtgaacaggtggcccagcaggtgatccgccccaccggcgtgctcgatccgatc
gtggaggtgcggcccaccaccggtcaggtggatgacctgctgggagagatccgcgaccgg
gccgcgaagcagcagcgggtgctggtgacgaccctcaccaagcgcatggcggaggacctc
accgactacctggcggagaacgaggtgcgcgtgcgctacctgcattcggagatccactcg
atcgagcggatcgagatcattcaggacctgcgcttgggtgaatacgacgtgctggtgggc
gtgaacctgctgcgggaggggctggacctgccggaggtgagcctggtggcgatcctcgat
gcggacaaggagggcttcctgcgggcggagcgttcgctgatccagaccatcggccgggcg
gcacgccatgtggagggtgtggccctgctctacgccgacaacctcaccgattccatggcc
aaggcgatttcggagaccgagcgccgccgggcgattcagcaggcctacaacgagaagcac
ggtgtggtgcccaccgccgccggcaagaaggccagcaattcgattctcagtttcctggaa
ttgagccgcaagctgaagcaggacggccccgatgccgatctggtgcaggtggccggcaag
gccgccaaggccctggaggaggaccccgatgccggcatggccctggaggcgctgccggag
ctgattgaacagctggaagggaagatgaaggaggcggccaagaagctggacttcgaggac
gccgccaacctgcgcgaccgcatcaagcagctgcgtcagaagatggcgggcaaggtctga
DBGET
integrated database retrieval system
