Picosynechococcus sp. PCC 73109: AWQ23_05355
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Entry
AWQ23_05355 CDS
T05693
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
syv
Picosynechococcus sp. PCC 73109
Pathway
syv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
syv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AWQ23_05355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syv03021
]
AWQ23_05355
03400 DNA repair and recombination proteins [BR:
syv03400
]
AWQ23_05355
Enzymes [BR:
syv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AWQ23_05355
Transcription machinery [BR:
syv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AWQ23_05355
DNA repair and recombination proteins [BR:
syv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AWQ23_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AMA10488
LinkDB
All DBs
Position
complement(1108683..1109624)
Genome browser
AA seq
313 aa
AA seq
DB search
MTQFQIECVESKTHKNQSQYSKFVFEPLERGQGTTLGNSLRRILLSNLEGTAVTALRIGG
VNHEFATIPGVREDALEIILNMKEIILKSYTHQPQIGRLTATGPGQVTAAQFDLPSEVEV
VDPTQYIATLADGAKLEMEFRIEKGKSYRAVQRNRDEATALDFLQIDAVFMPVTKVNYSV
DSIHSEGDAVRDRLTLEIWTNGSIKPEEALSQAAAIAVELFNPLKDLTLEAIQDELQEDE
DPTSQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGQKSAEEVIDALKT
RLGITLPEEKTAK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgacacagtttcaaatcgagtgtgtagaaagcaaaacacacaaaaatcaaagtcaatat
agcaagtttgtctttgaacccctagagcggggtcaaggaacaaccctcggcaattccctc
agacgaattctactgtctaacttagaaggaaccgccgtaacagcgctgcggattggtggc
gtgaaccatgagttcgcgacaatccctggtgtgcgggaagatgcccttgagattatcctc
aatatgaaggaaattattctcaagagctacacccatcagccccagattggccgcttaaca
gccactggccctggtcaggtgacggcggctcagtttgatctgccttctgaggtggaggtc
gtagatccgacccagtatattgcgaccctcgctgatggtgcaaagctggaaatggagttt
cggatcgagaaggggaaaagctatcgcgccgttcagcggaatcgggacgaggccactgct
ttagattttctacagattgatgcggtgttcatgccagtcactaaggtgaactatagcgtc
gatagtatccatagtgagggagacgcggttcgcgatcgcctaactctcgaaatctggaca
aacggcagtattaagccagaggaagcattatcccaggcagcggcgatcgccgttgaactg
tttaatcccctcaaggatctcaccctcgaagccatccaagatgagttgcaagaggacgaa
gacccaactagccaaattcccatcgaagaattacagctatcggtacgggcttacaactgt
ctcaagcgggcgcaaatcaactctgttgctgatcttttagactatagccaagaagatttg
ctagaaatcaaaaactttggtcaaaaatcagccgaagaagtgatcgacgccctcaaaacc
cgtttaggtattactttaccggaagaaaaaacggcgaagtaa
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