Synechocystis sp. PCC 6803 GT-S: SYNGTS_0007
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Entry
SYNGTS_0007 CDS
T02098
Symbol
rfbD
Name
(GenBank) GDP-D-mannose dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy00051
Fructose and mannose metabolism
syy00520
Amino sugar and nucleotide sugar metabolism
syy00541
O-Antigen nucleotide sugar biosynthesis
syy01100
Metabolic pathways
syy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
SYNGTS_0007 (rfbD)
00520 Amino sugar and nucleotide sugar metabolism
SYNGTS_0007 (rfbD)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SYNGTS_0007 (rfbD)
Enzymes [BR:
syy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
SYNGTS_0007 (rfbD)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
BAK48755
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All DBs
Position
complement(5534..6622)
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AA seq
362 aa
AA seq
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MSKSKVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKL
RLHYGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAIR
DYQHRTGIQVRFYQAGSSEMFGKVQEIPQKETTPFYPRSPYACAKVYGHWQTVNYRESYD
LFACNGILFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLGNIDSKRDWGYAKDYVRA
MWAMLQQEQPDDYVVATGETHEVKEFLEIAFGYVNLNWQNYVAFDERYLRPAEVDLLIGD
PAKTKAQLGWEPSVTFTELVHLMVEADLAVLGLTSPNQSGRIKELMAQDMAFIRSQNGHA
VD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtctaaagttgttttgctgacaggcatcacggggcaagatggctcctatctg
agtgaattgttgttggaaaagggctaccaagtccatggcatcattcgccgaacttctacc
tttaacactgaccgcattgatcatctttatgttgatccccatgatcttgaggcgaaactc
cgacttcattatggtgatctgaccgacggcaccaccctgcgccgcattttagaagatgtc
aaaccgacggagatttacaatctgggggcccaatcccacgtgcgggtgagctttgattct
ccggaatacactgtagattcagtggccatggggacgctacgactattggaagcgattcgg
gattatcaacatcgcaccggcatccaagtaaggttctatcaagccggttcttcggaaatg
ttcggcaaagtgcaggagattccccaaaaggaaaccacccccttttatccccgcagtccc
tacgcctgtgccaaggtttatggccattggcaaacggtgaactatcgggaatcctatgac
ttattcgcctgtaacggcattttgttcaaccacgaatccccccgccggggagaaaccttt
gtaaccaggaaaattactagggcgatcgccagaattgtggccggcacccaaaagaaattg
tatttaggcaatatcgattccaagcgggattggggctatgccaaggactatgtacgggcc
atgtgggccatgttgcaacaggaacagcccgatgactatgtggtggccacgggggaaacc
cacgaagtgaaggaatttttagaaattgcctttggttacgtcaacctcaactggcagaac
tatgtggcctttgatgagcgctatttacgccccgctgaagtagatttattaatcggcgat
ccggcgaaaaccaaagcccaattgggctgggaaccctcggttacctttacggaattagtt
catttaatggtggaggcagacttagcagtccttggtttaacttctcccaaccagagtgga
cgaatcaaggagctcatggcccaggatatggccttcattcggagccaaaatggccatgcc
gtcgattaa
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