Shinella zoogloeoides: K8M09_05240
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Entry
K8M09_05240 CDS
T07727
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
szo
Shinella zoogloeoides
Pathway
szo00470
D-Amino acid metabolism
szo01100
Metabolic pathways
szo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
szo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K8M09_05240 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K8M09_05240 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
K8M09_05240 (alr)
Enzymes [BR:
szo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
K8M09_05240 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
szo01011
]
Precursor biosynthesis
Racemase
K8M09_05240 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
UEX83622
LinkDB
All DBs
Position
complement(1058336..1059505)
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AA seq
389 aa
AA seq
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MSHHHPHARPTLPVAGEDHARLTIDLSALADNWRTMARRSGAARTAAVLKADAYGIGLEP
AAKTFHHAGARDFFVATPAEGAALRALLPDVRIYVLSGMWAGSERLFFEFDLVPVIVSEE
QLVVFMAAIAEGGDLPCVLHVDTGMSRLGLRVEDALALAEDAARPASFAPIMLLSHLACA
DDPAHPLNRQQLQRFRSVVKAFDDIDATLANSAGIFLGEDYHFTLTRPGIALYGGAAVNG
VPNPMKPVVTAEARILQVREAKAGESVSYGASAVLARDTRIAVAAIGYADGYMRSLSGSG
VPLRTAGISGASGVLHGHAVPLIGRVTMDLSHFDVTDLPPGSVRAGDFIELFGRAMPIED
VARAGGTIDYELLTSLGRRYERRYETAKK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcatcatccgcacgcacgccccaccctgcccgtcgccggagaggatcacgcc
cgcctgacgatcgacctttccgcgctcgccgacaactggcggaccatggcccgccgctcc
ggcgcggcgcgcacggcggcggtgctgaaggccgatgcctatggcatcggactggagccg
gcggcgaagaccttccaccatgccggcgcgcgggacttcttcgtggccacacccgccgag
ggcgcggcgctgcgcgcgctcctgccggatgtgcgcatctatgtgctgtccggcatgtgg
gccggctccgagcgactgttcttcgaattcgatctcgttccggtcatcgtctcggaagaa
cagctcgtcgtcttcatggcggcgattgccgagggcggggacctgccctgcgtgctgcat
gtcgatacgggcatgagccgcctcggcctgcgggtggaggatgcgctggcgctcgccgag
gacgcggcccggccggcgagcttcgcgccgatcatgctgctgagccatctcgcctgcgcc
gacgacccggcccatcccctcaaccgccagcagctccagcgcttccgcagcgtcgtgaaa
gccttcgacgacatcgacgcgacgcttgccaactccgccggcatcttcctcggcgaagac
taccacttcacccttacccggcccggcatcgcgctctatggcggcgcggcggtcaacggc
gtcccgaacccgatgaagccggtcgtcaccgccgaggcccgcatccttcaggtgcgcgag
gccaaggccggcgagagcgtcagctacggcgcatccgcggtgcttgcccgcgacacgcgc
atcgccgtcgcggccatcggctatgcggacggctatatgcgcagcctttccggttccggc
gtgccgctgcgcacggctggtatttccggggcgagcggcgtgctgcatggccatgccgtg
ccgctgatcggccgcgtgacgatggacctttcccatttcgacgtgacggacctgccgccc
ggcagcgtgcgcgccggcgacttcatcgagctgttcggccgcgccatgcccatcgaggac
gtggcccgcgccggcggcaccatcgactacgaacttctgaccagtctcggccgccgctac
gaacggcgctacgagactgcgaaaaaatag
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