Candidatus Nitrosocosmicus oleophilus: NMY3_02347
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Entry
NMY3_02347 CDS
T04185
Symbol
ffh_1
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa02024
Quorum sensing
taa03060
Protein export
taa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NMY3_02347 (ffh_1)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NMY3_02347 (ffh_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NMY3_02347 (ffh_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
taa02044
]
NMY3_02347 (ffh_1)
Enzymes [BR:
taa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NMY3_02347 (ffh_1)
Secretion system [BR:
taa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NMY3_02347 (ffh_1)
Eukaryotic Sec-SRP protein
NMY3_02347 (ffh_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
MobB
nSTAND3
AAA
MeaB
6PF2K
ParA
APS_kinase
AAA_30
AAA_17
AAA_7
AAA_33
CLP1_P
Arf
ResIII
MMR_HSR1
AAA_31
Thymidylate_kin
NTPase_1
VirC1
KAP_NTPase
Zeta_toxin
G-alpha
LpxK
ABC_tran
NPHP3_N
SRPRB
NACHT
AAA_18
ATP_bind_1
AAA_29
AAA_16
AAA_19
ArsA_ATPase
Acid_phosphat_B
Motif
Other DBs
NCBI-ProteinID:
ALI36543
UniProt:
A0A654M1S8
LinkDB
All DBs
Position
complement(2122936..2124300)
Genome browser
AA seq
454 aa
AA seq
DB search
MLDSLKDNLRLALKKIVGASDINEELINELCKDLQRALLAADVNVRLVLEITKNLKERSL
KETPPKGLSKKDHIITILYGELSKLLGYSGEAIKTIDRKKTDENLINFNSDKKNTILMLG
IQGSGKTTVIAKLARWLSKHGYRIGVIGADTWRPGALTQLKMNCSKINAQVYGEEGNKDA
LEIVKNGMGFFKDQPVDIIIIDTAGRHKEEQGLLEEMRTMYSIVIPDQVFLVIDGTIGQQ
AYNQAKIFHENAKISGIIITKLDGTAKGGGAIAASSATGAKVLFIGTGERIDDLEQFSPT
SFVGRLLGMGDIKALLEMARNLEIQSDENQAKRLMSGKMTIEDFYAQMENMGKMGFRNVI
ENLPGLSNFVKDDHLDVLQQKMEKWRFIIQSFTNDEKKNPDIINEARRKRIARGSGVMEH
DVKDLIKQYNNSKTMMKQAKGRQMQGLLRRFGLG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatagtttaaaagataatttgaggttggctttaaagaagattgttggggcctcg
gacatcaatgaagaattaatcaacgaattgtgcaaagatctccaacgagcgttgttggct
gctgatgtaaatgttcgattggtgttagaaataacaaaaaatcttaaagaaagatcatta
aaggaaactcctcccaagggtctgtcaaaaaaagaccacatcataactattctatacggg
gagctatcgaaattgctgggttacagcggtgaagctataaagaccattgataggaaaaaa
actgatgaaaatttaataaatttcaattcggataaaaagaacactattttaatgctcggg
atacagggtagtgggaaaactaccgtgatcgccaaattagcgaggtggctttcaaagcat
ggttataggatcggagtaatcggagcagacacctggcgacctggtgcgctgacccaacta
aaaatgaactgtagtaagatcaatgctcaagtctatggtgaggagggcaacaaggatgcc
cttgaaatagtaaaaaatggaatgggatttttcaaagatcagccggtggatattatcatt
atagatactgccggacgacacaaagaagaacaagggttacttgaagaaatgcgaacgatg
tattcaatcgttataccagatcaggtattccttgttatcgatggaacaattggacagcag
gcatataatcaggcaaagatcttccatgagaatgcaaaaataagtggcattattattaca
aaattggatggtactgccaagggaggtggggcaatagctgcctcttctgccactggtgca
aaagtcctttttataggaactggtgaaagaattgatgatttggagcaattttcccctaca
agctttgtgggtaggttattaggcatgggagacataaaagcccttcttgaaatggcacgt
aacttagaaattcaatccgacgagaatcaagcaaagagactaatgagtgggaagatgaca
atagaagatttctatgctcaaatggaaaacatgggcaaaatgggattccgaaatgtaatt
gagaatttaccagggctttcgaatttcgtaaaagatgaccatcttgatgttttgcaacaa
aaaatggagaaatggagattcataattcaatccttcactaatgacgaaaagaagaatcca
gacattattaacgaggctaggcgaaaaagaattgctagaggttctggagtgatggagcat
gatgtcaaggatcttatcaaacaatataacaattcaaagaccatgatgaagcaagcaaag
ggccgtcagatgcaaggactgctaagaagatttggtcttggctag
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