Candidatus Nitrosocosmicus oleophilus: NMY3_02354
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Entry
NMY3_02354 CDS
T04185
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
taa
Candidatus Nitrosocosmicus oleophilus
Pathway
taa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
taa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NMY3_02354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taa03019
]
NMY3_02354
03012 Translation factors [BR:
taa03012
]
NMY3_02354
Messenger RNA biogenesis [BR:
taa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NMY3_02354
Translation factors [BR:
taa03012
]
Eukaryotic type
Release factors
NMY3_02354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
baeRF_family10
acVLRF1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ALI36550
UniProt:
A0A654M0Q0
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All DBs
Position
complement(2130814..2132091)
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AA seq
425 aa
AA seq
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MPQSSSDDKWDSVKKYKLTKMLNDLSKISGHGTELVTVYIPPKRPIYDVLAQLRNEAGTA
SNIKSDLTRNHVQDALNKTMEQLKLYKEPPENGLVIFCGAIPTGKGLGTEKIEIFTVVPP
KPVQINLYRCDDHFWIDHIKEMLKDDRTIAIISIDTQEAGLGILTGDRWETIETLTSGVS
GKHRQGGQSARRFERLRDNELNEYYHRVANYAQKIFIDQYTVKGLIVGGPGPTKETFVRE
EYLDYRLQNNIVATLDTSYSGDEGVREIIDKVNDQGIMSEFRSMEEKKIVKKFMGEVFSG
KGLGIYGLTDVVNHLKAGITDSIIATDSIDLIYLEVICNKCDFRYEKIVERDQLVETKQN
IISSPCSKCGGQDYTINEKDFIDYLEEYASLAGTKLDIISSKTEEGAQIQSLGKIGALLR
FKPTV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcagtcaagtagcgacgataaatgggattcggtaaaaaaatataaattaactaaa
atgttgaatgacctgtctaaaatatctggtcacggtactgaactagttactgtatatatt
cccccaaaaaggccaatctatgatgttctagcgcaactaagaaatgaagctggtactgcg
tcaaacataaaatcagatttaaccagaaaccatgttcaggatgccctcaacaagacgatg
gagcaactaaaattatataaggaacctcctgaaaacggactagtcattttttgcggtgct
attcccactggaaaaggattgggaaccgaaaaaatagaaatattcaccgttgtccctcca
aaaccagtacagataaacctgtatagatgcgatgatcatttttggatagatcatatcaaa
gaaatgctaaaagatgatcgtactattgccattatttccatagacactcaagaggcagga
ttaggaattttgacaggtgatagatgggaaacaattgagaccttgacatctggagtttca
ggtaaacacagacagggtggacaatctgctagaaggtttgaacgcctcagagataatgag
cttaatgaatattatcatcgtgttgctaattatgctcaaaaaatctttattgatcaatat
acagtcaagggtctcatagtagggggcccaggacctacaaaagagacttttgttagagag
gaatatcttgactataggctccaaaataatatcgttgctacccttgatacctcttattct
ggcgacgaaggggtaagggaaatcatagacaaggtaaatgatcaaggaataatgtctgaa
ttccgatccatggaggagaagaaaatagtgaaaaaattcatgggggaagttttttctggg
aagggcttaggaatatatggcttgactgatgttgtaaaccacctaaaggctggaataacc
gattctataatcgctaccgatagcattgatttgatataccttgaagtaatttgcaataaa
tgtgatttcagatatgaaaaaatagttgaaagagaccagcttgttgagacaaaacaaaat
ataatttctagcccttgttctaaatgtggtggacaggactacacaattaatgaaaaggat
ttcatagactatttggaggaatatgcttcactagctgggacaaaacttgacataatttct
tcaaagaccgaagaaggggcccagattcaaagccttggaaaaattggagcactattgaga
ttcaaacctaccgtatga
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