Thermoplasma acidophilum: Ta0534
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Entry
Ta0534 CDS
T00037
Name
(GenBank) peptide chain release factor subunit 1 related protein
KO
K03265
peptide chain release factor subunit 1
Organism
tac
Thermoplasma acidophilum
Pathway
tac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ta0534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tac03019
]
Ta0534
03012 Translation factors [BR:
tac03012
]
Ta0534
Messenger RNA biogenesis [BR:
tac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Ta0534
Translation factors [BR:
tac03012
]
Eukaryotic type
Release factors
Ta0534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_LysW
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CAC11674
UniProt:
Q9HKR2
LinkDB
All DBs
Position
563460..564713
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AA seq
417 aa
AA seq
DB search
MLFMEDDEQIRRYEFKRALEELSKLHGRGTELISLYIPPDKQISDVVAYLRDEYSTSSNI
KSKSTRKNVLAAIESIMARLKYYKTPPPNGFVFFEGHIATRGDQTEMYTKIIEPPEPITT
FMYKCDSEFHLEMLKTMLEEKEIYGLIVIDRKEATVGFLNGTRIEVVDNVQSQVPSKHHQ
GGQSSRRFERLIEIAANEFFKKVGEIANNAFMPKIKDIRAIFLGGPGATKEYFFEKDYLR
NEVKEKIKDLFDVGYTDESGLRELVEKASESIKDMKISKEKDLMNRFLREVRKPDGGLAI
YGEQAIRDALEQKMVDLLLISEGLRKVRYTYRCPTCQAELTLNQEPNEWPVCEKDGTPME
LVAEDDFIEDLYRLAKESGAQVEIISDQSEEGKLLKQAFGGMAAVLRFIRKDNVQMM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgttatttatggaagatgatgaacagataaggagatatgaatttaagcgtgctctggag
gagctttcgaagttgcatgggcgaggaactgaactcatatcgctctacataccaccagac
aagcagatatcggacgttgttgcatacctcagggatgaatattcaacttcctcgaatata
aaatcaaaatccaccagaaagaatgtgctggccgccatagaatccattatggccaggctg
aaatactacaagactccaccacctaatggtttcgtcttcttcgaggggcacatagcgaca
agaggtgatcaaacggagatgtacaccaagataattgaacctcctgaacccatcaccaca
ttcatgtataagtgcgactcggaattccatctggagatgctaaagacgatgctggaggaa
aaggagatatatgggctcatcgtcatagacaggaaggaagcaaccgttggcttcctcaac
ggcacgagaatagaggttgttgataatgtgcagtcacaggttcccagcaagcatcatcag
ggcggccagtcctcgcgaaggttcgaaagactgattgagatagcggccaacgagttcttc
aagaaggttggcgaaatagcgaataacgcattcatgccaaaaataaaggacataagggca
atattcctgggtggtcctggagctacgaaggaatacttcttcgagaaggattacttgcga
aatgaagtaaaggagaagataaaggatctgttcgatgttggatacaccgatgaatctggt
ctcagagaacttgttgaaaaggcttcggaatccataaaggatatgaagatctcaaaggag
aaggatctgatgaacaggttcctccgtgaagtgagaaaacccgatggcggtctcgcaatt
tatggcgaacaagccatacgagatgcgctggagcagaagatggttgatctgctcctcata
tcagagggtctccgaaaggtcaggtatacatatcgatgtcccacatgccaggcagaatta
accttaaatcaagaaccgaatgaatggccagtttgcgaaaaggatggcactccaatggaa
ctggttgctgaagatgacttcatagaggacctttacaggctagccaaagaatcgggtgcc
caggtcgagatcatatcggatcagagcgaagagggtaaacttctcaagcaggcctttggc
ggcatggctgcagttctgaggttcattagaaaggataacgttcagatgatgtga
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