Tachyglossus aculeatus (Australian echidna): 119927792
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Entry
119927792 CDS
T10703
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu04151
PI3K-Akt signaling pathway
tacu04510
Focal adhesion
tacu04512
ECM-receptor interaction
tacu04820
Cytoskeleton in muscle cells
tacu04974
Protein digestion and absorption
tacu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
119927792 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119927792 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119927792 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119927792 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119927792 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
119927792 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tacu00535
]
119927792 (COL9A1)
Proteoglycans [BR:
tacu00535
]
Extracellular matrix (ECM) proteoglycans
Others
119927792 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119927792
NCBI-ProteinID:
XP_038601999
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Position
1:124210226..124290489
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AA seq
688 aa
AA seq
DB search
MASPARERGTFFLLGVFLHLVCSCLAQRGPPGAQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPNGEAGKPGSPGKPGIPGADGLTGPDGSPGPVGPRGQKGEPGVPGSRGFPGRGTP
GPPGPPGSAGLPGELGRIGPSGDPGKRGPPGPPGPPGPSGTIGHYDGDPLCPNACPPGRS
GHPGLPGPMGHKGAKGEIGEPGRQGHKGEEGDQGDFGDVGAQGPPGTQGLRGITGIVGAK
GDKGARGLDGEPGPQGLPGAPGDQGQRGSPGETGPKGDRGIQGPRGITGLPGSKGENGLP
GMDGRDGIPGMPGAKVLKNIFQGEPGKPGPPGDVGLQGLPGLPGIPGAKGVAGEKGNSGA
PGTSGVIGNSGKPGEQGPPGETGTRGPRGPPGSRGELGPIGPPGPPGKLGSQGDPGLPGV
PGPPGLPGLKGDRGPVGEPGPKGEQGGAGEEGEAGGKGELGDIGLPGPKGSEGNPGEPGS
RGPEGIRGLPGVEGPRGSPGPRGMQGEQGVPGLPGIQGPAGRAPTDQHIKQVCMRVLQEQ
LAQMAASLRRPASGPAGIPGKPGPPGVPGSPGENGFPGQMGPRGLPGLKGPPGELGLRGP
KGDLGEKGERGFPGRGPKGLPGVRGLPGDPGLASYGREGRDGERGPQGVAGLPGVPGPPG
PAGPPGFCEPSSCTVQAGQRAFSKGPDQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctagccccgctcgggaacgggggaccttcttcctcttaggggtcttcctacacttg
gtttgctcttgcctggctcaaagaggtcctccaggtgcccaaggtccgccgggtccccct
ggacccccaggagtgcccggaatcgacggcatcgatggagaccgaggtcccaagggcccc
ccaggccccccggggcccaatggcgaggcagggaaaccaggctctccagggaagcccggc
atccccggcgcggatggactgacaggccctgatggatcacctggtcctgttggcccaaga
ggacaaaaaggtgaacctggagtgccgggatctcgtggatttccaggccgtggtactccc
ggacctcctggtcctcctggatctgcaggacttcctggcgaacttggtcggattggacca
tctggtgatcctgggaaaagaggcccgcctggacctccaggccctcctggaccaagtgga
acaattggacattatgatggtgatccactgtgccctaatgcatgtccacctggtcgctcg
gggcatccaggcctacctggaccgatgggtcacaaaggagcaaaaggagaaattggtgaa
ccaggaagacaaggtcacaagggtgaagaaggtgaccagggagatttcggggatgttgga
gctcaaggccctcctggtacacaaggcctaagaggtataaccggtatagttggtgccaaa
ggggataaaggagctcgtggcctcgatggagaaccaggtcctcaaggtcttccaggagcc
cctggtgatcaaggacagcgaggttcaccaggagaaacaggtccaaagggtgacagaggt
attcaaggtcctagaggaataactggtcttccgggatccaaaggcgaaaatggtttgcca
gggatggatggaagagatgggatacctggaatgcctggagcaaaagtactgaaaaatata
tttcagggtgaaccagggaagcctggccctcctggggatgttggacttcaaggactccct
ggtttaccgggaattccaggtgcaaaaggtgttgctggtgaaaagggtaattcaggtgct
cctggtacttctggtgtgataggaaattctggcaaaccaggcgagcagggaccacctggg
gaaacagggacccgagggccaagaggaccaccaggcagcagaggagaactggggcctatt
ggtcctccaggaccaccaggcaagctgggttcccaaggtgatccaggtcttccaggtgtt
cctggcccccctggacttcctggattgaaaggagacaggggtccagttggtgagcctggt
ccaaaaggtgaacaaggtggtgctggtgaagaaggtgaagcaggtggaaagggtgaacta
ggagacataggattgcctggccctaagggatcggagggcaatcctggtgagcctggttcg
agagggcccgaagggattcggggacttcctggcgtagaaggcccaagaggatcacctggt
ccccggggcatgcagggggaacagggcgttcctggcttgcctggcatccagggccctgct
ggcagagcaccaacagatcaacacattaagcaggtttgcatgagagttttgcaagaacaa
ctagctcagatggctgctagcctccggaggcctgcatctggtcctgcaggaattccagga
aaacccggaccaccaggagtgccaggatcccctggagagaatggttttcctggacagatg
ggaccacgtggccttccaggtcttaaaggtcctcctggtgagctcggcttgagaggcccc
aaaggtgacctgggagaaaagggggagagaggatttccaggaagaggacccaaaggcctg
ccaggagtccggggccttccaggtgatccaggcctagcaagctacgggagagaaggacga
gatggggagcgaggtccccagggtgtggctgggctacctggagtccctggaccaccaggc
cccgcgggacctccagggttttgtgagccatcatcctgcacagtgcaagctggccaacgt
gcctttagcaaagggcccgatcagtga
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