Tachyglossus aculeatus (Australian echidna): 119934025
Help
Entry
119934025 CDS
T10703
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tacu Tachyglossus aculeatus (Australian echidna)
Pathway
tacu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tacu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119934025 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tacu03019
]
119934025 (CNOT1)
Messenger RNA biogenesis [BR:
tacu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119934025 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119934025 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
119934025
NCBI-ProteinID:
XP_038609301
LinkDB
All DBs
Position
11:55034820..55121602
Genome browser
AA seq
2382 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASIEECRSIIRQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLQNVVFGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFNFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLGGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTAALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKPPLAGQVSTIVTTSTTTTAKTITITRPTGVSFKKDVPPSINTTNIDTLLVA
TDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSI
EPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGM
ITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMA
IMNVLAELHQEHDLKLNLKFEIEVLCKNLALDISELKPGSLLKDKDRLKNLEEQLSAPKK
DVKQPEELPAITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTIP
LFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAA
HHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNCE
LACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKV
GGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCITELEQ
HLHAIPPALAMNPQAQALRSLLEAVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLL
LRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQ
YDLHLAQSMENGLNYMAVAFAMQLVKILLVDERTVAHVTEADLFHTIETLMRINAHSRGN
APEGLPQLMEVVRANYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVN
LYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRAQ
AEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVL
LQDHDVRQNDFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGF
VYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKG
TLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDM
LSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQL
INALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQL
RYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPA
FKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggc
cccgaagcagacaggcatttattacgctgcctattttcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcgtcg
ttgattacgaagccaaactttatctcgacgctgtcctatgccattgataatccattgcat
tatcagaagagtctaaagccgtcaccccacttatttgcccaattgagtaaagttctcaag
ttaagcaaagtgcaggaggtaatttttggtcttgcgctcttgaattcatctagctcagat
ctacgaggttttgctgcccagtttatcaaacaaaagcttccagatcttctgcgctcttac
attgacgcagacgtcagcggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ttgcacctcctcctctcccatctcctctttgggcagaagggagcctttggggttggacag
gaacagatcgacgcattcctcaagacgttgcgtagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgactctggagggatagctaaaaccatgatggagagctctcttgcagacttcatgcaa
gaagttggctatggcttttgtgcaagtattgaagaatgtcgcagtataatcaggcagttt
ggtgttcgggaggttacagcagcccaggttgccagggttttgggaatgatggcccgaact
cattcagggttgacggatggaattccattacagtccatttcagcccctggcagtgggata
tggagcgatggaaaagataaaagtgatggtgcacaggcccatacctggaatgtggaagtc
ttaattgatgtcttgaaggagctgaaccctagtttgaacttcaaggaagtaacttatgaa
ctggaccaccctggatttcaaattcgtgacagtaaggggctgcagaatgtggtgtttggc
attcagagaggccttggcatggaagtcttcccagtagatctcatttataggccgtggaaa
cacgctgagggccagctctccttcattcagcattccctcataaatccagagatcttctgt
tttgctgattatccctgtcataccgtggcaactgatatcctgaaagcaccaccagaagat
gacaatcgagaaatagccacatggaagagcctggacttgattgaatccctcttgcgactg
gctgaggtgggccagtatgagcaggtcaaacaactcttcaacttccctatcaaacactgc
ccagatatgttggtattagccttactgcaaatcaacacctcctggcataccttgcgacac
gaactcatctccacactgatgccaattttccttggaaaccaccctaattctgccattatt
ttgcactatgcatggcatggccagggccagtctccctcaattcgccaacttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtacgaccaggcaaaactgtctcggatt
cttgatgtggcccaagacctgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgtcgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcgtgtatgactttctta
aagagacggtgcccttctatcttgggtggccttgccccagagaaggatcagcccaaaagc
gcccaacttcctccagaaacactggcgaccatgttggcctgtcttcaagcgtgtgccggg
agtgtttctcaagagctttcggagaccatcctcactatggtggccaactgcagcaatgtc
atgaacaaggccaggcagcccccccctggagtcatgccaaagggacgcccccccagtgca
agcagcctagacgccatttctcctgtacagattgactctcttggtgggatggcatctctt
agtataggtggttcagctgccccccacacccaaagtatgcagggttttcctccaaatttg
ggttctgccttcagtacccctcagtcaccagcaaaagcatttccacccctttctacccca
aatcagaccacagctttcagcggtatcggagggctgtcttcacaacttccagtaggtggc
cttggtacaggcagcctgactggtataggaactgcagctcttgggctccctgcagtgaat
aatgatccgtttgtgcagaggaaactgggcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaagcaaatcagcacttt
agcaaagagatagatgatgaagcaaacagctattttcagcgtatttataaccatccacca
cacccaaccatgtctgttgatgaggttttagaaatgctacagaggtttaaagactccaac
ataaaacgggaacgagaagtgtttaactgcatgctgaggaacttgtttgaagagtatcgg
tttttcccccagtacccagataaagagctgcatataacagcctgcctctttggtgggata
atagaaaaaggactggttacttacatggctcttggtctggccctgcgctatgttcttgaa
gcgttacgcaagccgtttgcatccaaaatgtattattttggaattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagtttcctcatcatctacaggagtacattgaatatggccagcagtctcgagac
cctcctgtgaaaatgcagggttccatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaggtcccagcaaaacctcctcttgctggtcaggtcagcactatcgta
accacctccaccaccaccacggcgaaaaccatcacgatcacccggccaacaggagtcagc
ttcaaaaaggatgtgccaccttctattaatactaccaacatagatacactgctagtggcg
actgatcagactgagagaattgtggaaccaccagaaaatgtgcaagagaaaattgccttc
atcttcaacaatctctctcaatcaaacatgacacagaaggttgaggagctgaaagaaacg
gtaaaagaggaatttatgccttgggtttcacaatacttggtaatgaagagagtcagtatt
gagccaaacttccacagcttgtattcaaatttcctcgatactcttaagaatcctgaattt
aacaagatggttctgaatgaaacctacagaaacatcaaagtgctactgacatcagataaa
gctgcagccaatttctcagaccgttccctactgaagaacctgggccactggctgggaatg
attacactagctaaaaataaacccatcttgcacactgacttggatgtaaaatctttgctg
ctcgaagcttacgttaaaggacaacaagaattgctttatgtggtgccctttgttgccaaa
gtactggaatccagtgttcgaagtgtggttttcaggcctccaaacccctggactatggcc
attatgaacgttttagctgagttacatcaagaacatgacctgaagctaaacttgaaattt
gaaattgaggtgctgtgcaagaaccttgcattagacatcagtgagctaaaacccgggagt
cttctgaaggataaagatcgattaaaaaacttagaagaacagctgtctgctccaaagaaa
gacgtaaaacaaccagaagaacttccagccatcacaacaactactgcctcgacaacacca
gctactagtactacctgtaccgctacagttcctccacaaccacagtacagttaccatgac
atcaatgtgtactcacttggagggttggccccacacattactctaaatcccacgattcca
ttgttccaggcccatccacagttaaagcagtgtgtacgccaagcaatcgaacgtgctgta
caagagcttgtccaccccgtggtggataggtccattaagatcgccatgactacttgtgag
caaatagtcaggaaggattttgcactggattcagaggagtcacgcatgcgaatagcagcg
catcacatgatgaggaatctgacagccggaatggctatgataacttgcagggaacctttg
ctgatgagtatagctaccaacctgaaaaacagcttcgccactgcgctgcgggctgcatct
cctcagcaaagggaaatgatggagcaggcagctgcgcagttagctcaggacaattgtgaa
ttagcctgctgcttcattcagaagactgccgtggaaaaagcaggccctgaaatggacaag
aggctagcaactgagtttgagctgcgcaagcatgctaggcaggagggccgaaggtactgt
gatcccgttgtattaacctaccaggccgagcggatgccagaacagatcaggctgaaggtg
ggaggtgtggacccaaaacagctggctgtttatgaggagtttgctcgcaatgtccctggc
ttcttgcctactaatgatttaactcagcccacgggattcttagcgcagcctatgaaacaa
gcttgggccacagacgatgtagcccagatttatgacaagtgtattacagaactggaacag
cacctgcatgccattccacctgcattggccatgaaccctcaagctcaggctcttcgcagc
cttttggaagctgtggtgctgtctcgcaactctcgtgatgccatagcggcacttgggttg
cttcagaaggcagtagagggtttactggatgccacaagcggcgcggatgccgacctgttg
ctgcgttaccgagagtgtcatctactcgtcctgaaagcgctgcaggatggtcgggcctat
ggttcgccatggtgtaataaacagatcacgaggtgcctgattgagtgtcgagacgaatat
aagtataacgttgaagcagtggaactgctgattcggaaccatctagttaacatgcagcag
tatgacctgcacctggctcagtcaatggagaatggtttgaactacatggcagtggcattt
gctatgcagttggtgaagatcctgttggtggatgaaaggactgtagcccatgtaacagag
gcagatttatttcacaccattgaaactctgatgaggattaatgctcactccagaggaaat
gcccccgaaggattaccccagctgatggaagttgtgcgggccaactacgaagccatgatc
gatcgtgctcatggaggtcctaacttcatgatgcattctggaatctctcaagcctccgag
tatgatgaccctccaggcctaagggagaaggcagagtatctcctgagggagtgggtgaat
ctctaccattcagccgcagctggtcgtgacagtaccaaagctttctctgcgtttgttgga
caggtagagcttttggaaagaaagatgcaccagcaaggaatcttgaagaccgacgacctc
ataacgagattctttcgcctgtgcacagaaatgtgtgttgagatcagctatcgagctcag
gccgagcagcaacacaatcctgcggctaaccctaccatgatccgagccaaatgctatcat
aacctggatgcttttgtgcgactcattgcccttctggtcaaacactcgggggaggccacc
aatacggtcaccaagataaacctgctaaataaggttctcgggatcgtggtgggcgtcctc
ctgcaggatcacgatgttcggcaaaacgattttcagcagcttccgtaccaccgtattttc
atcatgctgcttttggaactcaatgcccccgagcatgtcttggagacgattaattttcag
acgctcacagctttctgcaatacattccacatcttgaggcctaccaaagcgccgggcttt
gtgtatgcctggcttgagctgatctcccaccggatatttatcgcacgaatgctggcgcat
acaccgcagcagaagggctggcccatgtatgcccaactactgattgatttgttcaagtat
ttggctcccttccttagaaatgtggaacttaccaaacctatgcaaatcctgtacaagggt
actttacgagtgctcctggtgttattgcatgactttccagaattcctttgtgattaccat
tatgggttctgtgacgtcatcccgcccaattgcatccagctaagaaatttgatcctgagt
gcctttccacgcaacatgaggctcccagacccgttcactcccaacttaaaggtggatatg
ttaagtgaaattaacattgctcccagaatcctcaccaatttcacaggagtgatgccacct
cagttcaaaaaagatttggattcctaccttaaaactcgctcaccggtcacgttcctttcg
gacttgcgcagcaacctacaggtatcgaatgaacccgggaatcgttacaacatccaactg
atcaacgccctggtgctgtacgtgggcacgcaagccatcgcccacatccacaacaaaggt
agcacgccctccatgagcaccatcacccattcggcgcacatggacatcttccagaacctg
gccgtggacctggacaccgaaggtcggtacctgttcttgaatgccatcgctaaccagctg
cgatatccgaacagccacactcactacttcagttgtaccatgctgtaccttttcgcagag
gccaacactgaagctatccaggaacagatcaccagggttctcttggaacggttgattgta
aataggccacatccttggggtctcctcattaccttcatcgagctgattaaaaacccagcg
tttaagttctggaaccacgagttcgttcactgtgccccagaaatcgaaaagttgttccag
tcggttgcacaatgctgcatggggcagaagcaggctcagcaagtgatggaagggaccggt
gccagttag
DBGET
integrated database retrieval system
