Tepidanaerobacter acetatoxydans Re1: TepiRe1_1409
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Entry
TepiRe1_1409 CDS
T02434
Symbol
ymdB
Name
(GenBank) putative hydrolase involved in biofilm formation
KO
K09769
2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:
3.1.4.16
]
Organism
tae
Tepidanaerobacter acetatoxydans Re1
Pathway
tae00230
Purine metabolism
tae00240
Pyrimidine metabolism
tae01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tae00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
TepiRe1_1409 (ymdB)
00240 Pyrimidine metabolism
TepiRe1_1409 (ymdB)
Enzymes [BR:
tae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
TepiRe1_1409 (ymdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YmdB
Metallophos
Motif
Other DBs
NCBI-ProteinID:
CCP26149
UniProt:
F4LUB3
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All DBs
Position
1344012..1344797
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AA seq
261 aa
AA seq
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MKVLRIFMIGDIVGRPGRTIIREKLLFLRKKYEVNFIIANGENAAGGNGITEKIAQELFI
SGVDFITTGNHVWDNKDIFNFIDTENRIIRPANYPNSPGKGYQIVQIGAGTKIGILNISG
RTFMPPLDCPFKTADLIIQEMKNMTKVIVVDFHAEATSEKIAMGWYLDGRVSLVAGTHTH
VQTADERILTNGTAYITDIGMTGPCNSVLGIEKERIINKFISQMPVRFEVAKGPAEINGI
IVDIDESTGRALKIQRIREST
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggtactaaggatatttatgattggagatatagtaggcagaccaggaagaaccata
attagagaaaagctattatttttaagaaagaaatacgaagtaaattttattattgcaaat
ggtgaaaatgccgcaggaggaaacggtataacagaaaaaattgctcaagagctttttata
agtggcgttgattttataaccacaggcaatcatgtctgggataataaagatatttttaat
tttatagatacggaaaataggataataagaccagccaattatccgaatagtccaggaaaa
ggttatcagatagttcaaattggggcaggcacgaaaatcggtattttaaatatttcgggc
agaacgtttatgcctcctcttgactgcccatttaaaacagccgatctaataatacaagag
atgaaaaacatgacaaaggtaattgtagtggatttccatgcggaggctacttcggagaaa
atagctatgggatggtatcttgatggccgagtttctttagttgctggaactcacacccat
gtacaaactgctgatgaaaggatacttactaatggaacagcctatataactgatattgga
atgacaggtccgtgcaattcagttctaggcatagagaaagaaagaatcataaacaaattt
atatctcaaatgccggtgagatttgaagttgccaaaggacctgctgaaataaatggaata
attgtagatatagatgaatcaacaggaagagctttgaaaattcaaagaattagggaatca
acatga
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