Triticum aestivum (bread wheat): 123078563
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Entry
123078563 CDS
T07757
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123078563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
taes03400
]
123078563
DNA repair and recombination proteins [BR:
taes03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123078563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_19
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
123078563
NCBI-ProteinID:
XP_044357048
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All DBs
Position
3D:307270379..307274321
Genome browser
AA seq
1057 aa
AA seq
DB search
MPDPEDKDGAEDGHEEEDKEEEEEDKEEDEWEQEEEEESEESEEDSEEPEAEEEPGRRVL
SDARLAGRYTGPWPGGEIFPKRKFEGWYITKMADTGSPGGTVASRLRSKRRCPDAKLLRQ
ATRRKPYCVDTPSQSSSDAEEDEKDKPPPHPARSSSDEGGRGHGRTGIRRPRRRGQNADD
DSDEDGRTATRRRRGQNAAHSDEDFEEPGGMAAARRREKQRMEEDDDAADGGDEADEQGA
SWRAKKEGAASCRQAAGRKCKDFPAEGWEQQGDVTFKKSSLVPPRRQDGRDQETYDDLLY
SIFEGIETTLQNASLPLDAPVPAPEQGGDPFPLVFSFGVVDEVVPEKTALDDLWAQRDLA
LDLEAESNKVSSHTCHKDEESDEHEIPAHGGTFCKRGKHDLFHDDQIGIRCRKCDYIEIE
IRHVFPSMAKESTDREPAAEHDRLDMFVDDILKSVGYEGASNVGLASDKTGVVWDLIPGV
REDMFPHQREGFEFMWRKLAGGIDIEQLRHTMNTDTTSGCVISHAPGTGKTRLAITFVQS
YLELFPHCRPVIIAPRGMLATWEQEFSKWNVKLPFHVLSSSEIQWNQDKTIHKLVSKDHG
LGQKLAMKKLSQKSKMMLKLASWYEGSSIIGLSYSLYRNLAKGEGKDGEMQRNLLLEKPG
LLVLDEGHTPRNKKSLIWKVLAEVSTEKRIILSGTPFQNNFLELYNILCLVKPKFAKDFA
CTRLSKKGVASTSQSRAAPQVEEDEGKEFWSSLRISNITDEHITEIREKLGPFVHIHNGD
ILQKSLPGLRESVVILNPLPRQKEIIAMMEESAGKGFLDAEYKISLASIHPFLVTSTKLS
DTEASVVDKMKSVRLNPCEGVKTWFVFEIIRLCEALKERVLVFSQYLEPLALIMDQLTTE
LDWTEGKEILLMSGNVRVKQREALMEAFNDMNSEAKVMLASTKACCEGITLVGASRVVLL
DVVWNPSVGRQAIGRAYRIGQEKIVYTYNLIAEGTKEKVKYDRQATKDHMSKLLFSNEPQ
PTGSNLSPELISNDRILEKMAAREELKDMFVQILPSH
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgccggatccagaggataaggacggtgcagaggacgggcatgaggaagaagataaagag
gaggaagaggaagataaagaggaagatgaatgggagcaggaagaagaggaggagtcggag
gaatcggaagaagattccgaggaacctgaggcagaggaagaaccgggccgtcgcgtgctt
agcgatgccaggctcgccggtcggtacacggggccgtggccgggcggcgagatcttcccc
aagcggaagtttgaagggtggtacatcaccaagatggcggacaccggctctcctggcggc
accgtcgcgtcgcggctgcggtcaaagcggagatgccccgacgcgaagctgctccggcaa
gccacccgcagaaagccgtactgcgtcgacacgccgtcgcagtccagctcggatgcagag
gaggacgagaaagacaaaccaccgcctcatccagcgcggtcgtccagtgacgagggcggc
cgcgggcatggcaggacggggataaggcgcccacggcgcagaggacaaaacgccgatgat
gactctgacgaagatggcagaacggcgacgaggcggcgccgaggacaaaacgctgcccac
agcgatgaagacttcgaggaacccggcggaatggccgccgcgaggagaagggagaagcag
cgcatggaagaagatgatgatgctgctgacggcggcgatgaggctgatgagcagggagct
tcctggagggcaaagaaagaaggagcggcgtcctgccggcaggcggccggccgcaagtgc
aaggacttccccgcagagggatgggagcagcagggcgatgtcaccttcaagaagagctcg
ctggttcctccgaggcggcaggacgggcgagaccaagagacttacgacgatctgctctac
tccattttcgagggaatcgagaccactcttcagaacgcctctcttcctctggacgcccct
gttcctgcaccagagcagggaggcgatccgtttcctctggtgttctccttcggggttgta
gatgaggtggtgccggagaagactgctctggacgacctgtgggcacaacgtgacttggcc
ttggacttggaggccgaatccaacaaggtttcttctcacacttgccacaaggacgaggag
agcgatgagcatgaaattcctgcacatggagggactttttgcaagcgagggaagcatgat
ctctttcatgatgatcaaatcggcattcgatgccgaaaatgcgattacatcgaaatcgaa
attagacacgtatttccatccatggccaaggaatcgacggatagggagccagcagcggag
catgataggcttgacatgttcgttgatgacatcctgaaatcagttggatatgaaggggca
agcaacgtggggttggcaagtgacaaaactggcgtcgtctgggatctcattcctggggta
cgggaagacatgttcccacaccagcgggaagggtttgagttcatgtggagaaaacttgca
ggagggatcgacattgagcagctgaggcacaccatgaacactgacaccacaagtggctgt
gtgatctctcatgccccggggaccggcaagaccaggctagcaatcacattcgtgcaatct
tacctggagctcttcccgcactgcaggccagttatcattgcccccaggggtatgctggct
acatgggagcaggagttcagtaaatggaatgtcaagctcccgttccatgtcctcagttcc
agtgagatccagtggaatcaagacaagaccatccataaactggtctccaaggatcatggt
ctgggccagaagctggccatgaagaaactgagccagaaatccaagatgatgctgaagctg
gcatcatggtatgaagggagcagcatcatcggtctaagctattcgctctacaggaatctt
gccaagggcgaaggcaaggatggagaaatgcagaggaacctgcttcttgagaagcccggc
ttgctggtcctcgacgaggggcacacaccaaggaacaagaagagcctcatttggaaagtt
ctcgcagaggtcagcaccgaaaagcggataatcctgtcagggactccattccagaacaac
ttcctagagctgtacaacatcttgtgcctggttaagcccaagtttgccaaagattttgct
tgtacaagactcagcaagaaaggagttgcttccaccagtcaatcaagagcagcgcctcag
gtggaggaggatgaaggcaaagaattctggagttcattaaggataagtaacatcacggat
gaacacatcactgaaatccgggaaaagctgggcccttttgtgcacatccataatggtgac
attcttcagaagtctcttccaggattgagagaatctgttgtgatcctaaaccctcttcct
cgtcagaaggaaatcatcgcaatgatggaggaaagtgcagggaagggttttcttgacgca
gaatacaagatatctcttgcgtccatacacccattcctcgtcacaagcacaaagctgtca
gacacagaagcctctgttgtggacaagatgaagagcgtgcggctgaacccatgcgaagga
gtgaagacatggttcgtttttgagatcatccgtctttgcgaagcactgaaagaaagagtg
ctggtgttcagtcaataccttgagccactggccctgatcatggaccagcttaccacagag
ctagactggacagaaggcaaggagatcctactcatgagtggaaatgtgcgtgttaaacag
cgcgaagccttgatggaagccttcaatgacatgaacagtgaggctaaggtgatgcttgca
tcaaccaaggcctgctgtgaaggaataacactggtcggtgcatcgcgtgtggttctcctt
gatgtcgtctggaatccttctgttggacggcaggcgattggccgagcctatagaatcggc
caggagaagattgtgtacacatacaacctgattgcagaaggaacaaaggagaaggtcaaa
tatgacagacaagctaccaaggatcacatgtccaaattactgttttcaaatgaaccgcaa
cctaccgggagcaatctgtcaccagaactgatatccaatgataggattttagaaaaaatg
gctgcacgtgaagaacttaaagacatgtttgtgcagattctcccttcccattga
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integrated database retrieval system
