Triticum aestivum (bread wheat): 123106092
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Entry
123106092 CDS
T07757
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123106092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123106092
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123106092
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123106092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
123106092
NCBI-ProteinID:
XP_044384234
UniProt:
A0A3B6KSI4
LinkDB
All DBs
Position
5A:complement(697095379..697114460)
Genome browser
AA seq
2404 aa
AA seq
DB search
MVPLNHPGVAAEVRLVLQGATDAGRESVRRELCQLVDYGHDGCLLLLQVCLDEVLLNDRE
AKNLQLKHDLLSATFRYCLDKTFFSTCFCEALMQIKTGTDGLLETLSSALELSVAEKVGI
GLALSDSDNSGMKLKGQQFAIAQIEKLCLNPNQSVPNDQIHEIVVFLHQTDGLTKHMDTF
SNIASLLEVGQSPFFAPIPKDQHDVQSINHSRHLEMYLDSTNDDFESLLSEIGKEISMAD
IVTELGYGCTVDSTQCKEILSTFQPLDDVAISKLLGAVIGTQNSLAEAHNTYATFVSAIR
NTHLSESPQLTTWNTDVLVDSINELAPSTNWVHVMESLDHEGFSIPDEAAFCLLMNIYGR
ACKDPFPLHAVCGSMWTNTEGQISFLKHAISAPATIFTFAHSSRLLALPDFASLGPGNHA
WFCLDLLEVLCQLAEVGHTVSVRSMLDYPLGHCPELLLVGLGHINTAYNLLQFEVLSCAF
PAILKDTTKRNVVKYLWHINPCLTLRGFVDAHSDPSCLLRIVDVCHDLKILSAVLESTPF
TFSIRLVAAACRKDHSHLEKWLTEKLTVYKDGFVEDCVNFLKEAMNAASYAVEGTAEQPQ
FSVVDTYWEACPPFIKVLQSHLGQLLSNQLSDELRELCALYESRNQGPVARDIPTSEGGS
DDVEVEANAYFHQMFSGQINIDVMIQMLTRFKESPDKREQSIFNCMISNLFEEYKFFTKY
PDKQLKLAAVLFGSLIKHELVAHLGLGIALRAVLDALRKSVDSKMFMFGTTALEQFMDRV
IEWPQYCNHILQISHLRATHAEMVSAIERALARISSSQNEPNAGNLLSTEQLVSGSSSIE
AMEASEPSWQLMGTSPTQLGRTPYPLQQRQPSVLGDRSKISIGTSQNKSILPSQPSVPSA
SADSAFNLKTTVPPSLAHSTSMSNSAHSTSFLRPRNTSTVLPWQHSYTTGFGNALNIETL
VAAAEQRDNPIETPPSEVQDKILFMINNISTSNMEAKAKEFNEVLQEQYYPWFAQYMVMK
RASIEPNFHDLYLKFFDKLNSRSLSKEMLKATYENCKVLLRSDLIKSSSEERSLLKNLGS
WLGKFTIGRNQTLRAKEIDPKSLIVEAYERGLMIAVIPFTSKILEPCHSSIAYRPPNPWT
MGILSLLSEIYNLPNLKMNLKFDIEVLFKNLSVDMKDVKPTSLLKDRGREVEGNPDFSNK
DVASSQTPVAAEVSSGVNPPIKHVDLQPEVNSTSRTLSLPTLYTAPVRLPPNSMVEDDKI
ALMMPEQVPSHTLTQVSSSQTPLVSLSPSPLSLTQLLSLIPHDEIRFKISSKLLPFGSQL
QFSKIMGVALDKAIKEIILPVIERSVSIASKTTKEIILKDYATESDYSAANRSARLMVGT
LAGSLAHVTCKEPLRVALLSHLRSLTQNLASNSETLEQVVQVLINDNLDLGCASIESVAA
RKAVDSIEGEITQSFSQQRKKREAAGPTYYDSFTYAQGPFAPVPEVFHTKAESPAQQRVY
EEFGHVWQSHGQSVGAAGSGTAAVSSNFGVPRAYSPSLAQASSAFLSAQTAPLTLTQPTE
LVYEELIPGAAQLSSDSPAQVGISDSSGWLGGTIGDASTSPPLMSNDLPAGGIMDLNVMT
PPPATFSDNLGSGLPDTLSTGDAMERYEQVSQKLEVLIAKDGKDVEIQSVVAEVPDILLK
CVNRDEAALAVAQKVFKSLYDNTSNSGFVMWSLATLVAIRDVCKLVVKELTNSVIYLDDE
KKFNSEIIFALIRSDLLDVKEYNVHLAKLIDGGRNKIATEFAMSLVQTLITQDSASISEL
QDVVDVLSKISRRPGSPELMQQVNEIARNNANNAPGFAFGKDKKVLPNRANKEENSVNDA
TVADSVAFQDQVAHLFSEWCQICDHPNASDAAYSRYVMQLQHIGLLKGDEFTERFFRILT
ELAVAHSLVSEQINAPGGLSQQSSHISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKI
LSVTIRVIQKDAEEKKASFNPRPYFRLFINWLNDLSTSELHHDGANFQVLAAFANAFHVL
QPSRIPSMSFAWLELVSHRTFMARLLTGNSQKGWPFFQRLLIDLFKFMEPYLRTADLLEP
VHLMYKGTMRVLLVLLHDFPEFLCDYHFSFCDVIPSSCIQMRNVILSAFPRNMRLPDPST
PNLKIDLLAEISLPPRIMSDVDGALKSKHMKADVDEYLKRPEGSSFLNDLKQKLVLPQNE
ANVAGTRYNVPLMNSLVLYIGIQAVQQLQANKANASASAQQINHNTMDIFQIETATEFFR
YLVTNLDTEGRYLFLNAIANQLRYPNSHTHYFSFIILYLFAEAAQEHIQEQVTRVLLERL
IVNRPHPWGLLITFIELIKNPRYNFWNRAFTHCAPEIKQLFESVAKSCGGGAGKAVDDGS
DGGH
NT seq
7215 nt
NT seq
+upstream
nt +downstream
nt
atggtcccactgaaccaccccggcgtcgccgccgaggtgcggctggtgctgcagggcgcc
accgacgccggccgcgagtccgtccgccgcgagctctgccagttagttgactatggtcac
gatggatgtcttttgctgctccaagtctgtttggatgaagtgctgctgaatgacagggag
gccaaaaacttgcagttgaagcatgatcttctatccgccactttcagatattgtctggat
aaaacgttttttagcacttgtttctgtgaggcactgatgcagataaaaactggtaccgat
ggcctccttgagactctgtcgagtgcactggaactctcagtggccgagaaagtcggtatt
ggtcttgcgctgtcagattctgataattcaggcatgaagctgaaagggcaacaatttgca
attgctcaaattgagaagttgtgtttgaatcctaatcaatcggtaccaaatgatcaaatt
catgaaatcgtcgtcttccttcaccagaccgatggcctgacaaagcatatggatactttt
agtaacattgcttctcttctagaagttggacagagtcctttttttgctcccatccccaaa
gatcagcatgatgttcagtcaataaatcattcaagacatttggagatgtacttggatagc
acaaatgatgactttgagtcacttctttctgaaattgggaaagaaataagtatggcggac
atagtaactgagttgggttatggatgcactgttgacagcacacagtgtaaggaaatactt
tccacttttcagcctcttgatgatgtggcaatatctaagttgctcggggcagttattggc
actcaaaatagtcttgcagaggcccataacacttatgcaaccttcgtatctgctattcga
aatacccacttgagtgagtcgcctcaattgactacatggaacacagatgttcttgtggat
tcaatcaacgaattggccccaagtactaattgggtgcatgttatggaaagccttgatcat
gagggtttcagtattcctgatgaagcagctttctgtttactgatgaatatatatggccgc
gcttgcaaggatccctttccgcttcatgctgtttgtgggtcaatgtggacaaatacagaa
ggccagatatcatttttaaagcatgcaatttctgcccctgctactatttttacatttgca
catagttcgaggctgctggcacttccggactttgcaagtcttggtccaggtaatcatgct
tggttttgccttgaccttctagaggttttgtgccagcttgctgaagttggacacactgtg
tcggtgcggtccatgctcgattatcctttgggacattgccctgaactcctacttgttggt
cttggacacatcaacactgcatataatctcctccaatttgaagtgctgtcctgtgcattt
cctgctattctgaaggacaccacaaagagaaatgtggtgaaatatctctggcatattaac
ccatgcctcacccttcgaggatttgttgatgctcattctgatccaagttgtctcctgaga
attgtggatgtgtgtcacgacctgaagatcctatctgctgtcctcgagtccactccattc
acatttagcattagattggtggctgctgcttgtaggaaagatcatagccatcttgagaaa
tggctcactgagaagttaactgtatacaaggacggttttgtcgaggactgcgttaatttc
ctgaaagaagctatgaatgccgcatcttatgcagtagagggtaccgcggaacaacctcaa
tttagtgttgtggacacgtattgggaagcttgtcctccctttataaaggttctccagtct
cacttgggacagctcttatccaaccaactctcggatgaactaagggagttgtgtgctctg
tatgaatcgagaaatcagggtcctgtagcaagggacatacctacctcggagggaggttca
gatgatgttgaagtagaagcaaatgcgtattttcaccagatgttttctggacagataaac
attgatgtgatgatacaaatgctcactcgcttcaaagaatctccagataagagggagcaa
tcaatttttaattgtatgatctcaaatctgtttgaggaatacaagttctttacgaagtat
ccggataagcagcttaaactagctgctgtgctatttggatcccttatcaaacatgaactt
gtggcccacctcggacttgggattgctctacgcgctgttcttgatgccttacgcaagtct
gttgattcaaagatgtttatgtttggtacgacagcattggaacaattcatggatcgtgta
atagagtggccacagtactgcaatcacatattgcagatttcacatcttcgagctactcat
gctgaaatggtctctgcaattgagcgagcacttgcccgaatttcatcaagtcaaaatgag
cccaacgctggcaacttgctttctacggagcagcttgtttctggatcgtcatctattgaa
gccatggaggcatctgaaccatcatggcagttaatgggtacatctccaactcagctagga
aggacaccttacccgttgcagcaaaggcaaccaagtgtccttggagacaggtccaagatc
tccatcggcacctctcagaataagagcattttacctagtcagccttcggttccttcagca
tctgctgattcagcctttaatttaaagactactgttccaccttcattagctcactctacg
agcatgtcaaatagtgctcattccactagttttctgcgcccccggaatacctcgacagtt
ttgccctggcaacattcctacactacgggatttggaaatgctttaaatattgagacactt
gtagcagcagcggagcaaagagataatccaattgagactcccccatctgaagttcaggac
aagatcttgtttatgattaacaatatatccacctctaatatggaagccaaggcgaaagaa
tttaatgaagtgcttcaggaacaatattatccttggtttgcacagtacatggtcatgaaa
agggcaagcatcgagccaaattttcatgatttatacctgaaattctttgacaaacttaac
tcaagatccttgagtaaggagatgctgaaagctacatatgagaactgcaaggttttgtta
agatcagatcttatcaaatctagttccgaggaacgttccttgctaaaaaatttgggcagt
tggttgggaaaatttaccattggaagaaaccagacattaagagccaaggaaattgacccg
aaatctcttattgtggaggcttatgagagaggacttatgattgctgtaattccattcact
tcaaagattctcgaaccttgccattcaagtatagcatatcgtcctccaaatccgtggaca
atgggaattcttagtctactttctgagatctataatctaccaaacctgaagatgaatcta
aaatttgacattgaggtcctgtttaagaacctcagtgtggacatgaaagatgtgaaaccg
acttcccttcttaaagatcgaggacgtgaagttgagggaaacccagatttttcaaacaaa
gatgttgcttcgtcccaaaccccagtggctgcagaagtctcttcaggtgtcaacccccca
ataaaacatgtagacctgcagcctgaggtcaatagcacttcccgtaccctgagccttcca
actttgtatactgctcctgttcgtctccctcctaacagtatggtggaggatgataaaatt
gctctaatgatgcctgagcaagttccctctcacaccttgacccaggtctcatcttcacaa
acaccattagtatcactatcgccatcgccactctctctaactcagcttttgtcgctgatt
ccacatgatgagatacgcttcaaaataagctcaaaacttttgccttttggctcacagttg
cagttcagcaaaatcatgggtgtggctttggataaggctatcaaagagataatactccca
gtcattgaaagaagtgtctcaatagcaagcaaaactacaaaagaaattattctaaaggat
tatgcaacggaatctgattacagtgccgcaaatcgctcggctcgtttgatggtcggaaca
ttagctggaagtctagcccatgttacttgcaaggaaccgcttcgtgttgcgctactgtct
catctccgaagccttactcaaaaccttgctagcaacagcgaaactcttgagcaagtagta
caggttctgatcaacgacaatttggatcttggctgtgcaagtatcgagtctgtagcggcg
cgcaaggctgttgattcgattgagggtgaaataactcaatccttttcacaacaaaggaag
aaaagagaggcagctggtcctacatattatgactcttttacttatgctcaaggtccattt
gcccctgtacctgaagtattccataccaaggcagagtctcctgcccaacaacgagtatat
gaggagtttggtcatgtatggcagagtcatggccaaagtgttggtgctgcaggttctggt
acagctgctgtatcgagcaattttggtgtacctcgagcttacagcccaagtttagcacaa
gcttccagtgctttcttgtctgctcaaacagctccacttacattaactcagcctacagag
ctggtgtatgaggaattgattcctggcgctgcacaactttctagtgattctcctgctcaa
gttgggatcagcgactcttctggctggcttggtggaaccattggtgatgcatccacatct
ccacccttgatgtctaatgacttacctgcgggtggaataatggatttaaatgttatgacg
ccacctccagctacattttctgacaatctaggatctggtttacctgatactttgagcact
ggtgatgctatggagagatacgaacaggtttcacaaaagctggaagtcttgattgcgaag
gatggtaaagatgtggaaatccagtctgttgtagcggaagttcctgatatcttactcaaa
tgtgttaaccgggatgaggctgcattagctgttgcacaaaaggttttcaaaagtttgtat
gacaacacatcaaatagcggttttgtcatgtggtctctagcaaccttagttgcgataaga
gatgtatgcaagcttgttgtcaaggagctaacaaattccgtaatctatttggacgatgag
aagaagtttaatagtgaaatcatttttgcccttattcgttctgatttgctggatgtcaaa
gagtacaatgttcatttagcaaagctaattgacggtggaagaaacaagattgcaacagaa
tttgccatgtcacttgtccagacattgattactcaggactctgctagtatctcagaactc
caggatgttgttgatgtgctatcaaagatttcaaggaggccaggttcacctgagttgatg
caacaggtgaatgagattgcaaggaataatgctaacaatgctcctggttttgcttttggg
aaggataaaaaggttctacctaaccgtgcaaacaaagaggaaaacagtgttaacgacgcc
actgtagctgattctgttgcttttcaagaccaggttgcacacctattttctgagtggtgc
caaatatgtgatcatccaaatgctagtgatgcggcctatagtcgttatgttatgcagttg
caacatattggcctgctgaagggagatgaattcactgagcgtttcttccgaattctcacg
gaacttgctgttgcacactctctagtctctgagcaaattaatgctcctggtggattgtct
cagcagtcatcacatatatcatatttccccattgattcatattcgaagcttgtgtctgtg
gtgataaagaattgttcagtggaaataggaccaaataaaggcagccttcttcccaagata
ttgtcagtgacaattagggtcattcagaaagatgctgaagagaagaaagcttcatttaac
ccccgaccatactttcggctgtttatcaattggctgaatgaccttagtacttctgaactc
catcatgatggagctaatttccaggttttggctgcatttgcaaatgcattccatgtactg
caaccctcgagaattcctagcatgagctttgcttggcttgagttggtgagtcatagaacc
ttcatggcaagactgctgacgggcaattcacaaaaagggtggccttttttccaacggcta
cttattgatctgttcaaattcatggaaccgtatttgagaactgccgaccttttagaacca
gtgcaccttatgtacaaaggaactatgagagtgctgcttgtactactccatgactttcct
gaatttctgtgtgattatcacttcagtttttgtgacgtgatcccttccagttgcattcaa
atgcgcaatgtcattcttagtgcttttccgcgcaacatgagacttccagacccatctact
cctaacctgaagattgatctgctagctgaaatttcattacctccacgaatcatgtcagat
gtcgatggtgccctcaagtcaaagcatatgaaggctgatgtcgatgagtatcttaagaga
ccagaaggctcatcctttttgaatgatctgaagcaaaaattggtgctgcctcagaatgaa
gctaatgttgctgggacacgctacaatgtgcctctgatgaattcgcttgttctctacatt
ggcatccaagcggtgcaacaattgcaagcgaacaaggcaaatgcatctgcgtcagcacag
cagattaaccataatacaatggatatttttcagatcgaaacagcgactgaatttttcaga
tatcttgtaacgaacttggatacagaggggcgctacctatttttgaatgcgattgctaac
caactgcgctacccgaatagccacacacactacttctccttcatcattctgtatctattt
gctgaagctgcccaggaacatatccaggagcaggtaaccagggttctcttagaacggctg
atagtgaaccgtcctcacccctggggattactcatcaccttcatcgagctgataaagaac
ccacgctacaacttttggaaccgagccttcacacactgcgcacctgagattaagcagctg
tttgagtcggtcgcaaagtcatgcggtggaggcgctggaaaggcagtggatgatggctct
gatggcggccactaa
DBGET
integrated database retrieval system
