Triticum aestivum (bread wheat): 123114167
Help
Entry
123114167 CDS
T07757
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123114167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taes03021
]
123114167
Enzymes [BR:
taes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123114167
Transcription machinery [BR:
taes03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123114167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
123114167
NCBI-ProteinID:
XP_044391481
LinkDB
All DBs
Position
5B:complement(680876503..680889724)
Genome browser
AA seq
1654 aa
AA seq
DB search
MEQEQATSVEVDSILFGFYTDDEVRRLSVKRLTRSERLDAKNCPVPGGLLDPAMGPVNAN
DTCKTCAQQPGDCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSAQLVDRYA
RELELLARGHLVQAKNLQDSAVEMDESAEMDDGDDDSVDKPSHRGNKTWTSIQLKEAHSI
FSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAIADYNLEGDGHISNPN
GTGVSGLTDDRVKASSNQTKDLSDDRPLLTTEVESILKDLWEKEARFCMLLCDFQQNLCV
SEKRRGYEMFFLKSMLVPPNRFRPSTSSSLGIMEHPQNVMLSKVQEANLALQHDNPNHMD
ILTRWRDLQTSVNLFYDSSKGLGKSGKDGHGVRQLVDKKTGIVRQKIMGKRVNHSCRTVI
SPDPFLAVNEIGIPPAAALKLTYPEKVTPWNAKKLQGAISNGSEIHPGATRLKVNNHMYK
LQDDRNKRRGIAKMLAASKGSISQPGKDPKCEFESKVVYRHIQDGDIVLVNRQPTLHKPS
MMAHVVRVLAGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIG
PRSGEAVRGLIQDHIVGAVLLTKVDTFLSREEYSQLVYGSCVSSTRGPCQSGKRVSIVND
DDTLELLPPAFVKPERWTGKQVITTILNHLTKGHPPFTVEMKGKISVQYLTAKVRHVAEG
EKLRDPEELVLYIRHNELLKGMIDKNQFGNHGIVHTVHELYGADAAGRLLSIFSRLFTLF
LQFHGFTCGIDDLLLSQESNNERTDFLSKSEEHSEEAHKKFLCEKDVDTDLVKLQMKVEK
VVRRIGESANVALDKAMLSELNGLTTKVNKNMFPYGLQKPFPKNCLTLMTATGAKGGDVN
MTQISSLLGSQDLEGARVPRMISGKSLPCFPPWDSSSRAGGYVSDRFLTGLRPQEYYFHC
MAGRNGLIDTAVKTSRSGYLQRCLIKSLESLFVSYDHSVRNVDGSIIQFCYGEDGVDVHK
SSFLKKFKELADNRKAVSDRLARYKGELEIYNGDPLLFKSKYITKLPQELTESATDFHNK
NKCCCRKLKKKCRCHYNIKEEELMKLLKVKYMASLVDPGEAVGVILAQSLGEPSTQMTLN
TFHLAGRGDMNVTLGMPRIQEILMKASANIGTPYMKCPVHKGKKRKDAARLAEKLRGVTL
ADVVEGIEVCTVPFHNSNGHISSLYKLHLKLFSPDCYPPESELTVDECQASLRTVFVDAM
EYAIEKHLNLLHKVSGIQETRVKDTESLPSEGPEESEGRPTDGDESDASDGDDENEDDLG
ADAEKRKRQENDEMEYEDDIENEDGMNSDPDEETKHELDNEDDPAESGGESEENNEGHLS
DSSNKTAKLEGRLAASKLKESNETVENLEEQKQAQITRKRSKKLKLTVHVESADLNFEVH
YILHKEPHILLSQIAQKTLRSLFVSGSHNKNIGLCNVIWPEKEKKGESESKQKETERKDD
FRGLQTAGLDFEVFWDLQDLLDVRKLTSNDIHAMLRTYGVEAARATIINEVKAVFEPFGI
KVDPRHLSLAADFMTSGGSYRPMNSLGMARFCTSPFGKMSFEQATRFIMEAAYHGEVDNL
TGPSATVSLGKPAKTGTGAFGLLQNIALEERAVM
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagcaggcgacgtcggtggaggtggactccatcctcttcggcttctacacc
gacgacgaggtccggcggctcagcgtcaagcggctcaccaggtccgagcgcctcgacgcc
aagaactgccccgtgcccggcggcctgctcgaccccgccatgggccccgtcaacgccaac
gacacctgcaagacctgcgcgcagcagcccggcgactgcccgggccacttcggccacatc
gagctctccaagccgctcttcaacccgctgctcttcgacaccctccgggacctcctccgc
tccacctgcttcacctgccgcaagttccgcctcagcgcccagctggtcgacaggtacgcc
cgcgagcttgagctgctggcgaggggccatcttgtccaggccaagaacttgcaagattcc
gctgttgaaatggacgaaagcgctgaaatggacgatggcgacgacgattcggttgataaa
ccttctcaccgagggaacaaaacctggacatccatccagttgaaagaggcccattctatc
ttctccaagctgatgaagaagcgagtgaacaagtgtgcaaactgcggcatgaagaaccca
cctatcaaatgccagatatatggttggctcaccattcagggtacagatggttctgctgta
agaagaaaagcaatcgctgattataatcttgaaggagatggccatatttccaacccaaat
ggaactggtgtttctggtcttacggatgatagagttaaagcatcaagcaatcaaacaaaa
gacctttctgatgatagacctctcttgactacggaggttgaatctattctcaaagacctg
tgggaaaaggaagccaggttctgcatgttactatgcgactttcagcagaatttatgtgta
tcagaaaagaggaggggctatgagatgtttttcttgaagagtatgcttgtgccaccaaat
agattccgtccttcaactagttctagccttggaattatggaacatccacaaaatgttatg
ctaagtaaagtgcaagaggccaatcttgcgctacagcatgacaatcctaatcacatggat
attcttacaagatggagggatctgcaaacaagtgtaaatttattttacgatagtagtaaa
ggccttggaaaaagcgggaaagatggtcatggtgtacgacaattggtggataagaaaact
gggattgttcgacagaaaataatgggcaagagagttaatcattcctgccgtacggttata
tctccggatccgtttttagctgttaacgaaattgggattcctcctgctgctgctttaaag
ctgacttatcctgagaaagtgacgccctggaatgccaaaaagctacaaggagctataagt
aatggctcggaaattcatcctggtgcgacacgcttgaaggttaacaatcacatgtataaa
ttacaggatgaccgtaacaaacgtcgtggcattgctaagatgttggctgcttctaaagga
tcaatttctcaaccagggaaggaccctaaatgtgaatttgaaagcaaagttgtatatcga
catattcaagatggtgacattgtactggtcaacagacagcctactcttcacaagcccagc
atgatggcccatgttgttcgtgtgttggctggagagaagacaattcgaatgcactatgcc
aattgcagtacatacaatgctgattttgatggggatgaaatgaatgtgcacttcccacaa
gatgaaatatctcgggctgaggccatcaacattgttgatgcaaataagcagtacattggt
ccaaggagtggggaggctgtcagaggtctcattcaggaccacattgttggtgctgttctc
ctgacaaaagtggacacattcttgagccgtgaggaatacagtcagcttgtctatgggtct
tgtgtgtcctcaactcgtggtccttgtcaatctggtaaaagggtatccattgtgaatgat
gatgacacattggaacttcttcctccagcttttgtcaagccagagcggtggacgggaaaa
caggtcataacaaccatcttgaaccatttaacgaaaggccacccaccatttactgtggag
atgaaagggaaaatttcagtacaatatctaacagctaaagtacgccatgttgctgaagga
gaaaaacttagagatcctgaagaactagttttatatattcgccataatgagctcttaaag
ggcatgatagacaagaaccagttcgggaatcacgggatagtacatacagttcatgaactc
tatggtgcagatgcagctggaagattgctctcgattttcagccgcttgtttacattgttc
ttgcagtttcatggatttacttgtggaatagatgatctgttactatcccaagagtcaaat
aacgagaggacggattttttgtcgaaaagtgaggaacacagtgaagaagcccataagaaa
tttctgtgcgagaaagatgttgatacagatctagtgaaattgcaaatgaaggtcgaaaag
gttgttcggagaataggagaatctgcgaacgttgcgttggataaagcaatgttaagcgaa
ctaaatgggttaacaactaaggtcaacaagaacatgtttccctatggtctacaaaagccc
ttccctaaaaattgtctcactcttatgactgcaactggagcaaaaggaggcgatgttaac
atgacacaaatctcgtcattgctaggctcacaagatttagaaggagcgcgtgttccacga
atgatatctgggaagtcattaccttgctttccaccatgggatagttcttcaagagctggt
ggttacgtcagtgacagatttttaactggtctccgccctcaagagtactatttccactgt
atggctggcagaaatgggttgattgacacagcagtcaaaacatctcgtagtggatatctt
cagcgttgtcttatcaaaagtcttgaatcattgtttgtttcatatgatcactctgtgcgt
aatgttgatggatcaatcatacaattctgctatggagaagatggagttgatgtccataaa
agtagcttcctcaaaaagtttaaagaactcgctgataatagaaaagctgtgtctgacagg
cttgcgaggtacaagggtgagcttgagatctacaatggcgatcccctgttattcaagtcc
aaatacattactaaactgcctcaagagctcaccgaaagcgcaacggattttcacaataaa
aacaagtgttgctgccgcaagcttaaaaagaagtgtcgctgccattataacatcaaggag
gaggaactaatgaagttactgaaagtcaagtacatggctagccttgtagatcctggtgaa
gctgttggtgtgatccttgctcagtccttaggagaaccttcaacgcagatgacgctcaac
actttccatcttgctggaagaggggacatgaatgtcacacttgggatgcctcgcatacag
gaaatcctaatgaaagcatcagctaatattggcacaccttatatgaagtgccctgtgcat
aaaggcaagaagaggaaggatgctgcacgtctggctgaaaaactaaggggtgttacgttg
gctgatgttgtggaaggaattgaagtatgcacagttccttttcacaatagtaatgggcat
atttcgagtctctataagttgcatctaaaactattctcaccagactgttaccctcctgag
tcggaacttacagtagatgagtgtcaagcatccttgagaactgtgtttgttgatgctatg
gaatatgcaatcgaaaaacacctaaatttgctacacaaagttagtggaatccaggaaaca
agggtaaaggacactgagagtttaccatcagaaggtcctgaagaatccgagggcagacct
actgacggtgacgagtctgatgcgagtgatggtgacgatgaaaatgaggacgacttggga
gctgatgcagaaaagaggaaacgacaagagaatgatgagatggagtatgaggatgatatt
gaaaatgaagatggcatgaacagtgaccctgatgaagagacaaaacatgaacttgataat
gaggatgatccagctgagtctggtggagaatcagaagagaataacgaaggacatttgtca
gattccagtaacaagactgcaaaattagaaggcaggcttgcagctagtaaactcaaggag
agtaatgaaacggtggaaaacttggaggagcagaagcaggcacaaataacccggaaacgc
agcaaaaagttaaagctgactgttcatgttgaaagcgcagatttgaattttgaggttcac
tacatcttgcacaaggaaccacatattttactatcccagattgcccagaagacgttgagg
tccctatttgtcagtggatcccataacaaaaacataggtctatgtaatgttatttggcca
gagaaggaaaagaaaggtgaaagtgaaagcaaacaaaaagagacggagaggaaagatgac
tttcgagggctgcaaacggcaggactggactttgaggtattctgggatctgcaggactta
ctggacgtccgcaagcttacatctaatgacatacatgctatgttgaggacatacggggtg
gaggctgcgagggccaccatcattaacgaggtgaaggccgtgtttgagccctttggcatc
aaggtagacccgaggcacctgagcctggctgctgatttcatgacctcgggaggctcctac
cgaccgatgaacagcctcgggatggcccggttctgcacgtcgccgtttggcaagatgagc
tttgagcaggccacgaggttcatcatggaggcggcctaccacggggaggtggacaacctc
accggcccttcggcgaccgtgtccctggggaaaccggccaagacggggacgggtgccttt
gggctgctgcagaatatcgccctggaggagcgggcggtgatgtaa
DBGET
integrated database retrieval system
