Triticum aestivum (bread wheat): 123145697
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Entry
123145697 CDS
T07757
Name
(RefSeq) THO complex subunit 5A-like isoform X1
KO
K13174
THO complex subunit 5
Organism
taes
Triticum aestivum (bread wheat)
Pathway
taes03013
Nucleocytoplasmic transport
taes03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
taes00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123145697
09122 Translation
03013 Nucleocytoplasmic transport
123145697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taes03019
]
123145697
03041 Spliceosome [BR:
taes03041
]
123145697
Messenger RNA biogenesis [BR:
taes03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123145697
Spliceosome [BR:
taes03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123145697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
123145697
NCBI-ProteinID:
XP_044421104
UniProt:
A0A3B6QIZ2
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All DBs
Position
6D:complement(442434651..442439706)
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AA seq
797 aa
AA seq
DB search
MATVLAAEAMDVEAPARPPSATTAPKPRSLHDLLAETRASVEEVAARILAIKKDGAPKSE
LRELVAQMSLLLITLRQVNREILMEEDKVKGETEAAKAPVDSTTLRLHNLLYEKNHYVKA
IRSCLDFQTKHPGIDLVPEEEFHRTAPADIRDKTLAADTAHDLMLKRLNFELVQRKELCE
RHEKLEQQKNSLLGTIANQKKFLSSLPSHLKSLKKASLPVQQQLGMLHTKKLKQHHAAEL
LPSPLYITYTQLLGQKEAFGENIEVEVNGSTKDAQTFAQQQAKQEMAGTLANDDSNRMDD
DAIDEEEDAQRRRSRSRKSSKEASNPALAYQLHPLKVVLHVYDTEDPGTKRRKLITLRFE
YLAKLNVVCVGSEDSDGMDSNILCNLFPDDTGLELPHQMAKLYAGETPNFSEKDSRPYKW
AQHLAGIDFLPEVPQSVGDSSNRASRNADLSSGLALYRQQNRAQTILQRIRSRKIAQMAL
TWQLSYLTKLRWPHIEHENTPWASRTPSCSMHSWSLTGVFPEPSARSALVVSGPAGSVDS
DLERRSVTNGQETEGNREDGELPIVVHSEDMPDDSKVSQAEVSPEVLNHSRGLSLISKGS
APSKLSISHSFGRNEDDLDFLMDSDSELEELACADQETEQGSLTIDKSWEDYASREFTMV
LSKTLKNGSKVMLEAKIKISMEYPLRPPLFRLQLVSEKTGDLKWHNDLRAMEAEVNLHIL
RILPRSYEDYILTHQVLCLAMLFDMHLDEDHEKRKVTSVIDVGLCKPVSGTMLTRSVRGR
DRRQTIYWRGDVCSSYL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggtgctggcggcggaggccatggacgtcgaggcaccggcgcgtccccccagc
gccaccaccgcgccaaagccacgctcccttcacgacctcctcgccgagacccgcgcctcc
gtcgaggaggtcgccgcccgcatactcgccatcaagaaggacggcgcccccaagtccgag
ctccgcgagctcgtcgcgcagatgtccctcctcctcatcacgctccgccaggtgaacagg
gagatactgatggaggaggataaggtgaagggggagacggaggcggcgaaggcgcccgtg
gactccaccacgctgaggctgcacaacctgctgtacgagaagaaccactacgtcaaggcc
atcaggtcgtgcctcgacttccagacgaagcacccggggatagacctcgtccccgaggag
gagttccaccgcaccgcgccggctgacatccgtgacaagactctcgcggcggacaccgcc
cacgacctcatgctcaagcgcctcaacttcgagctcgtccagcgtaaagagctatgtgag
cgacatgagaaattggaacaacagaagaacagtttgctggggacaattgcaaatcagaag
aagttcctttcaagcctcccatcgcatttgaaatcactgaagaaagcatctttgccagtg
cagcagcagcttgggatgctgcatactaagaaattaaagcagcaccatgcagctgagttg
ctcccatctcctctttatataacttacacccagttgttaggacagaaagaagcatttggc
gagaatattgaagtggaggtaaatggaagcacaaaggacgctcaaacttttgctcaacag
caagccaaacaggaaatggcaggtactttggcaaatgatgatagtaataggatggacgat
gatgcaattgatgaggaagaagatgctcagagaagaagatcaaggtctaggaagagttca
aaggaagctagtaatcctgcattagcatatcaacttcatccactcaaagttgttctccat
gtatatgatactgaagatcctggaaccaagcgtcgtaagctcatcactttgaggtttgaa
tacttggcaaagttgaatgttgtctgtgttggatctgaagattcagatggaatggacagc
aatatcctgtgcaacctatttccagatgacaccggcttagagctgcctcatcagatggct
aagctttatgctggggagactccaaattttagtgaaaaggattcgcgtccgtacaagtgg
gcacagcatctagctggtatagacttcctcccggaggttcctcaatctgttggggatagt
tctaacagagcgtcgagaaatgctgatttgtcatctgggcttgcactataccgtcagcag
aatcgtgcacagactattttgcagagaatccgctctcggaaaattgcacaaatggctctc
acgtggcaacttagttatttaactaagctgaggtggcctcacatagaacacgagaataca
ccatgggcatcacgcaccccatcgtgtagtatgcacagttggtcattgacaggagttttt
cctgagccttcggctcgttctgctttagtggtgagtgggcctgcaggaagtgttgacagt
gatttggagagaagatctgtgacaaatgggcaagaaaccgagggtaacagagaggatggt
gagcttccaattgtggttcactctgaagatatgccagatgattctaaagtatcacaggca
gaggtctcacctgaagttctaaaccattctagaggcttatctcttatatcaaagggctct
gcaccatctaagctaagcatctcacacagttttggtagaaatgaggatgatcttgatttc
ttaatggacagtgacagtgagttggaggagctggcatgtgctgaccaagaaactgagcaa
ggtagcctcactatagataaatcctgggaggattatgcttccagagagttcaccatggtc
ttgagtaaaactttgaagaatggttcaaaagtcatgctggaagccaagattaaaattagc
atggagtatcctcttaggccaccacttttcagattgcagctggtttctgaaaagaccgga
gatttgaaatggcacaatgatcttcgtgcaatggaagctgaggtgaatcttcacatcctc
cgaattcttcctcggtcgtacgaggactatatattaacccaccaagttctgtgcctggct
atgttatttgatatgcatttggacgaggatcacgagaaaaggaaagttacttcagtgatt
gatgtcgggctctgcaaaccagtcagtggaaccatgctcactagatcggtcagggggaga
gaccgcagacagaccatctattggcgaggtgacgtttgctctagttatttgtga
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integrated database retrieval system
