KEGG   Terribacillus sp. DMT04: KS242_08350
Entry
KS242_08350       CDS       T07391                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
taid  Terribacillus sp. DMT04
Pathway
taid03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:taid00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KS242_08350 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:taid03019]
    KS242_08350 (rny)
Messenger RNA biogenesis [BR:taid03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KS242_08350 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B DUF2844 KH_NusA_2nd KH_2 DUF4407 Exonuc_VII_L UPF0242
Other DBs
NCBI-ProteinID: QXE03164
LinkDB
Position
1565131..1566693
AA seq 520 aa
MELFYLIISILLVLIVGGVVGYLVRKSIAEKKISGAEELAKQIVAEGHRNAETAKKEALL
EAKDENFQLRQQTEQELRERRLELQKQENRLMQKEENLDRKSDTLDKREVTLEKKEQSLT
ERQQQIEELESKVEVLVKEQQLKLEQISGYTSDEARQIVLDKVEKEVAFESAVMIKDAEH
RAKEEADKKAKSILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRREIARIALEKLVQDGRIHPARIEEMVEKSRREVDEYIR
ETGEETTFEVGVHGLHPDLVKILGRLKYRTSYGQNVLKHSMEVAYLSGLLAAELGEDVTL
AKRAGLLHDIGKAIDHEVEGSHVEIGKELAMKYKEHPVVINSIASHHGDEEATSIIAVLV
AAADALSAARPGARSETLENYIKRLEKLEEISESFQGVEKSFAIQAGREIRIMVKPDEID
DLESIKVARDIRKRIESELDYPGHIKVTVIRETRAVEYAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggaactattttacctgatcatctccattttgcttgttctaatcgtcggtggtgttgtt
ggttatcttgttcgcaaatctattgctgagaaaaaaatctccggtgcggaggaattagcg
aagcaaatagtcgcagaaggccatcgcaatgcggaaacggctaaaaaagaagcgcttctc
gaagcgaaagatgaaaacttccagctgcgtcagcagacggagcaggaattacgtgagcga
cgtctcgaactgcaaaagcaagaaaaccgtctgatgcagaaggaagagaatctggaccgt
aaaagcgatacgcttgataagcgtgaagttacgttagagaaaaaggaacaatcattaact
gaaagacaacaacaaattgaagaattggaaagcaaagtggaagtcttggtgaaagaacag
cagctgaaattagaacagatttctggctatacatccgatgaagcacgtcaaatcgtgctg
gataaagtcgagaaggaagttgcctttgaatcagctgttatgattaaagatgcagaacat
cgcgccaaagaagaggccgataaaaaagcgaaaagcattctttcccttgcacttcagcgc
tgtgcagccgatcatgttgcggaaacgacagtatctgtcgttaacttgccgaacgacgag
atgaaaggacgcatcatcggtcgggaaggccgtaatattcgtacactagagacgcttacc
ggaattgatctgattattgatgatacgccagaagcggttatcctatccggttttgatcct
gtccgtcgtgagattgcaaggattgcactcgagaaacttgtccaagatggtcgtatccac
cctgcccggattgaggaaatggtggagaaatccagacgggaagtggatgaatatatccgt
gaaacaggtgaagagacgactttcgaagttggcgtacatggtttgcatccggacttagtt
aagatacttggcagattgaagtatcgcacaagctacgggcagaacgtattgaagcactca
atggaagttgcttatctgtccggactgttagcagccgaactgggcgaggatgtcacactt
gcaaaacgcgcaggtctgcttcatgacatcggaaaagcgatcgaccacgaagtagaaggc
agccacgttgaaatcgggaaagagctcgcaatgaaatacaaagagcatccagtggtcatc
aattcgattgcttcccaccacggagatgaggaagcgacatctattattgcagtgctagtc
gctgcagcagatgccctctcagctgcccgtccgggagcaagaagtgagacattggagaac
tacatcaagcgtctggagaaactggaggagatttctgaatccttccaaggcgtagagaaa
tctttcgccattcaagcaggacgtgagattcgtatcatggttaagccggatgaaattgat
gacttggaatccattaaagtcgctcgtgatattcggaaacgaattgaaagtgaattggat
tatccaggacacattaaagttacggttatccgtgaaacacgtgcagttgaatatgcaaaa
taa

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