Terribacillus sp. DMT04: KS242_08350
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Entry
KS242_08350 CDS
T07391
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
taid
Terribacillus sp. DMT04
Pathway
taid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
taid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KS242_08350 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
taid03019
]
KS242_08350 (rny)
Messenger RNA biogenesis [BR:
taid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KS242_08350 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
DUF2844
KH_NusA_2nd
KH_2
DUF4407
Exonuc_VII_L
UPF0242
Motif
Other DBs
NCBI-ProteinID:
QXE03164
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Position
1565131..1566693
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AA seq
520 aa
AA seq
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MELFYLIISILLVLIVGGVVGYLVRKSIAEKKISGAEELAKQIVAEGHRNAETAKKEALL
EAKDENFQLRQQTEQELRERRLELQKQENRLMQKEENLDRKSDTLDKREVTLEKKEQSLT
ERQQQIEELESKVEVLVKEQQLKLEQISGYTSDEARQIVLDKVEKEVAFESAVMIKDAEH
RAKEEADKKAKSILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPVRREIARIALEKLVQDGRIHPARIEEMVEKSRREVDEYIR
ETGEETTFEVGVHGLHPDLVKILGRLKYRTSYGQNVLKHSMEVAYLSGLLAAELGEDVTL
AKRAGLLHDIGKAIDHEVEGSHVEIGKELAMKYKEHPVVINSIASHHGDEEATSIIAVLV
AAADALSAARPGARSETLENYIKRLEKLEEISESFQGVEKSFAIQAGREIRIMVKPDEID
DLESIKVARDIRKRIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggaactattttacctgatcatctccattttgcttgttctaatcgtcggtggtgttgtt
ggttatcttgttcgcaaatctattgctgagaaaaaaatctccggtgcggaggaattagcg
aagcaaatagtcgcagaaggccatcgcaatgcggaaacggctaaaaaagaagcgcttctc
gaagcgaaagatgaaaacttccagctgcgtcagcagacggagcaggaattacgtgagcga
cgtctcgaactgcaaaagcaagaaaaccgtctgatgcagaaggaagagaatctggaccgt
aaaagcgatacgcttgataagcgtgaagttacgttagagaaaaaggaacaatcattaact
gaaagacaacaacaaattgaagaattggaaagcaaagtggaagtcttggtgaaagaacag
cagctgaaattagaacagatttctggctatacatccgatgaagcacgtcaaatcgtgctg
gataaagtcgagaaggaagttgcctttgaatcagctgttatgattaaagatgcagaacat
cgcgccaaagaagaggccgataaaaaagcgaaaagcattctttcccttgcacttcagcgc
tgtgcagccgatcatgttgcggaaacgacagtatctgtcgttaacttgccgaacgacgag
atgaaaggacgcatcatcggtcgggaaggccgtaatattcgtacactagagacgcttacc
ggaattgatctgattattgatgatacgccagaagcggttatcctatccggttttgatcct
gtccgtcgtgagattgcaaggattgcactcgagaaacttgtccaagatggtcgtatccac
cctgcccggattgaggaaatggtggagaaatccagacgggaagtggatgaatatatccgt
gaaacaggtgaagagacgactttcgaagttggcgtacatggtttgcatccggacttagtt
aagatacttggcagattgaagtatcgcacaagctacgggcagaacgtattgaagcactca
atggaagttgcttatctgtccggactgttagcagccgaactgggcgaggatgtcacactt
gcaaaacgcgcaggtctgcttcatgacatcggaaaagcgatcgaccacgaagtagaaggc
agccacgttgaaatcgggaaagagctcgcaatgaaatacaaagagcatccagtggtcatc
aattcgattgcttcccaccacggagatgaggaagcgacatctattattgcagtgctagtc
gctgcagcagatgccctctcagctgcccgtccgggagcaagaagtgagacattggagaac
tacatcaagcgtctggagaaactggaggagatttctgaatccttccaaggcgtagagaaa
tctttcgccattcaagcaggacgtgagattcgtatcatggttaagccggatgaaattgat
gacttggaatccattaaagtcgctcgtgatattcggaaacgaattgaaagtgaattggat
tatccaggacacattaaagttacggttatccgtgaaacacgtgcagttgaatatgcaaaa
taa
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