Thermocrinis albus: Thal_0742
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Entry
Thal_0742 CDS
T01179
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tal
Thermocrinis albus
Pathway
tal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Thal_0742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tal03021
]
Thal_0742
03400 DNA repair and recombination proteins [BR:
tal03400
]
Thal_0742
Enzymes [BR:
tal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Thal_0742
Transcription machinery [BR:
tal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Thal_0742
DNA repair and recombination proteins [BR:
tal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Thal_0742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_5
AF1548-like_C
YcgL
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ADC89375
UniProt:
D3SQD8
LinkDB
All DBs
Position
complement(708329..709282)
Genome browser
AA seq
317 aa
AA seq
DB search
MLREFVYPSKVYWEEKTKTYGRFVVEPLERGFGITVGNALRRTLLSSIEGTAITGVKVYG
AYHEFSTVEGVLEDVLEIIANLKRVRFRLRESHVEILYLKKRGEGEVYARDIILPPSVDL
ITPDVKIATITSPDTELHIEIRVERGFGYVPTEEMESFGEVGWILVDADFSPVRHVSYRV
EKTRVERRSDYDRLIMEIRTDGSKTPEEVVKEAVQILLRNFSSLENIAQEIPFVAEEPVV
VDELMEKLSLPIEELDISQRSLNSLKRIGINTLGELVRLTEEDLKSTKNVGRKAINEIKE
ALKQMGLYLGMDIESRR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggagtttgtgtatccgtcgaaggtttactgggaagagaagactaaaacctac
ggaaggttcgtggtagagcctctggagagagggtttggtatcacggtaggtaacgcctta
aggagaacgttactctcatctatagagggaacggccataacgggggttaaggtatacgga
gcctatcacgaattttccaccgtggagggtgttctggaagacgtgctggaaataatagcc
aaccttaagagggttaggttcagactgagagaatcccatgtggagatcctttacctgaag
aaacgtggtgagggtgaagtttatgcgagggacataattctaccaccctccgtagacctc
ataactcccgatgtcaagatagccaccataacttctcccgatacggaactgcacatagag
ataagggtggagagaggttttggatatgtacctacagaggagatggaatcctttggggaa
gtgggatggatactggtggacgccgacttttctcccgtcagacacgtctcttatagggta
gaaaagacaagggtggagaggcggagcgattacgataggctcatcatggagataaggaca
gatggcagcaaaactccagaagaagtagtgaaagaagctgtgcagatattactgagaaac
ttctcttctcttgagaacatagcccaagaaattccctttgtggcagaggagccggtagtg
gtggacgaacttatggagaagttgtctcttcctatagaagagctggatatctcccaaagg
tcccttaactctctcaagagaataggtatcaacactttaggtgaattggtgagacttacg
gaagaagatctcaagagcaccaagaacgtgggtaggaaggctataaacgagataaaggag
gctcttaaacagatgggactttaccttggtatggatatagagagcaggaggtga
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