Thermocrinis albus: Thal_0999
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Entry
Thal_0999 CDS
T01179
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
tal
Thermocrinis albus
Pathway
tal02020
Two-component system
tal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Thal_0999
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Thal_0999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tal03021
]
Thal_0999
Transcription machinery [BR:
tal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Thal_0999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
LacI
HTH_24
HTH_Crp_2
HTH_3
MarR_2
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
ADC89631
UniProt:
D3SLK1
LinkDB
All DBs
Position
complement(935614..936753)
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AA seq
379 aa
AA seq
DB search
MLRNQVKASVEAKLNLTILLKGHLQLLTVPSEELQAILEEDLKDAPYVFQTMSRRVRWFR
QDLPAPQVASKRSWWESILQQIKMELDGTELDVAMDIIYCLDDRGFFRGDVNSIAERWGV
HPDYVEDIREFIMKELEPTGIASKSMEEFIKVQIEEMFPDNGDLLKEVLEFFRTGRASKA
VKELAGRLKLYPAEDETTEYSSGSVDLLLEWDGEEWYVVVRDDFIEIGGEEDLPKEVLEK
VKRWNVLLSLRRNILRKAGELILERQKDFLLGKGPLKSLTMRELAQVVNVSLSSVSRVLS
NKYVKTPVGIFPIKFFFKRESKDGYSTEEVLRAVKEVIQQLGDVSDRKLCEALRAKGINL
ARRTVCKYRRMLSHERHSG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaatcaggtaaaggcctcggtagaggcaaagctcaatcttaccatacttctc
aaggggcaccttcaacttctcacggtaccctccgaggaacttcaggccattttggaagag
gacctgaaggatgctccttatgtttttcagactatgagcagacgtgtcaggtggtttcgc
caggatctaccggctcctcaagtggccagcaagaggagttggtgggaaagcattctgcag
cagatcaagatggaacttgacggtacagaactggatgtagctatggatatcatctactgt
cttgacgacagaggtttctttagaggagatgttaactctatagcggaaagatggggtgtg
catcccgactatgtggaggacataagagagttcatcatgaaggaactggagcctacaggt
atagccagtaagagtatggaggagtttataaaggttcagatagaggagatgtttccagat
aatggggatctgcttaaagaagttttggagtttttcagaacgggaagggcctctaaagct
gtgaaggagcttgccggtagactgaagctttatcctgcggaagatgaaactaccgagtac
tcttcaggtagtgtggatctcctcttagagtgggacggcgaggagtggtacgtggtggtc
agagatgactttatagagataggaggagaggaagatctccccaaggaggttctggaaaag
gtaaaacgctggaacgttcttttatctttgagaaggaacatcctaaggaaggccggtgag
cttatactggagaggcagaaggatttccttttaggaaaggggcccctcaagagtctcacc
atgagggagctggcacaagtggtcaacgtgagtctttcatcggtaagtagagtcctatcc
aacaagtacgtcaaaacacctgtggggatttttcccattaagttcttcttcaagagggaa
agtaaggacgggtacagtaccgaggaggttttaagagcggtaaaggaggtcatacagcag
ctgggcgatgttagtgacagaaaactctgcgaagctcttagggccaagggtataaaccta
gcgagacgcacagtatgtaagtacaggagaatgttgtcccatgaaagacattctgggtaa
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