Tyto alba (Barn owl): 104357643
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Entry
104357643 CDS
T07816
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104357643 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104357643 (NUP88)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104357643 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
STX6_10_61_N
Sec10_HB
Citrate_synt
FliD_C
Motif
Other DBs
NCBI-GeneID:
104357643
NCBI-ProteinID:
XP_042647473
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MAAEWGAAEQWRAALPQHAVLSRLRERAAPHGSPPTPARPPLIRNLLFGLDGDLFLWDGE
RSALHTIGLRRLGGPDPAGLSRYQTLICINPPLFEVYQMLLSPTQHHVALIGTKGLMVLE
LPKRWGKNSEFEGGKSTVNCSTIPIAERFFTSSTSLTLKHAAWYPSETLEPHIVLLTSDN
TIRFYSLKVPQTPIKVIALSDTEEETLTIRKGRAYTASLGETAVAFDFGLLVPVPKNILG
QRRNEEVLAYPLYILYENGETFLTYISLLQSTGNLGKLLGPLPMHPAAEDNYGYDACAVL
CLPCVPNILVIATESGMLYHCVVLEGEEDDEQSEKSWDPRSDLTPCLYVFECVELELALK
LASGDEEEPLESDFSCPIKLHKDPKCPSRYHCTHEAGVHSVGLTWINKLHKFLGSDEEDK
DSLQELGAEQKCFVEHILCTKPLPSRQPAPIRGFWIVSDILGPTMICITNTYECITRPLL
STVHPASPPLLCTREDKDVAVSPLRILAESQHSFEKHIGSILQRSSANPLLLKSADKDAA
PPPEECLQLLSRATQVFREEYILKQDLAKEEIQQRVKLLWGQKKKQLEDLNYCREERKSL
REMAERLADKYEEAKEKQEDIMNRMKKVLRSFHSRLPVLSDSEKDMKKELQTIHDQLQHL
SNAIRQVKMKKEYQQKKMEKGTSPKKPSITLSAYQSKCIQTVLKEEGEHIREMVKQINDI
RNHVNF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagtggggcgcggcggagcagtggcgtgcggccctgccgcagcacgcggtg
ctgagccgcctccgcgagcgcgccgccccccacgggtcccccccgaccccggcgcggccg
ccgctcatccgcaacctgctcttcggcctcgacggagatctcttcctctgggatggcgag
cgcagcgccctccacaccatcggcctccgccgcctcggcgggcccgaccccgccgggctc
agccgctaccagacccttatctgcataaacccacccctttttgaggtttatcagatgctg
ttaagccccacgcagcatcatgtggcgctcatcggtacgaaggggctcatggtgctggag
ctgcccaaacgctgggggaagaattcagagtttgaaggtgggaaatccacggtgaactgt
agcactattcctattgcggaaaggttcttcacaagctcgacatctctgactttgaagcat
gctgcctggtatccctctgagacattagagccccatattgtgctcttaacttcagataac
actataaggttttacagcctgaaggtacctcagacacccatcaaagtgattgctctttca
gacactgaggaggagactcttacaatcagaaaagggagagcttatacagcatcgctggga
gagaccgcggtggcgttcgacttcgggctgctagtgccggtcccaaagaacattctcgga
cagcgaaggaatgaagaagtgttggcctatccactttatattttgtacgaaaatggagag
acattcctcacatatatcagcctgctacagagcactggaaatcttggcaagctgctcggc
cctctgcccatgcaccctgctgcagaagataactatggctatgacgcctgtgctgtcctt
tgcctgccttgtgttccaaacatcctggtgattgccaccgagtcaggaatgctttaccac
tgtgtggtactggagggagaagaggatgatgagcagtcagaaaagtcatgggacccaaga
tctgatcttactccttgcctgtacgtgtttgaatgtgttgagctggaacttgcactgaaa
ctggcatcaggagatgaagaagagcctttggagtccgatttctcttgcccaatcaaactg
cataaagatccaaaatgtccctctagataccactgcacacacgaagctggtgtccacagc
gtggggctgacatggatcaataaactgcacaaattccttggttcagatgaagaagacaaa
gacagtttacaagagctgggagcagaacagaagtgctttgttgaacatatcctttgtaca
aaaccgctgccatccaggcaacctgctcccattagaggattttggatcgtttctgacatc
ctgggacccacaatgatctgcatcaccaacacctatgagtgtatcacaaggcctctctta
agcacagtccatcctgcatccccgccgctgctctgcaccagagaagacaaagatgttgct
gtttcccctctccgtatcctggctgagtctcagcattcatttgagaagcacattggaagc
atcctgcagcgcagttctgccaaccccttgcttctgaagtctgctgataaagatgctgct
cctccccctgaagaatgccttcagcttcttagcagagccacacaagtgttcagagaggaa
tacatactgaaacaggatctggcaaaagaggaaattcagcaaagagtgaagctgctgtgg
ggacagaaaaagaaacaactggaagatcttaattactgtcgagaggaaaggaaaagtttg
cgggaaatggccgagcgcttggctgacaagtacgaagaagccaaagagaagcaggaagat
attatgaacaggatgaagaaagtacttcggagcttccactctcggcttcctgttctatca
gacagtgaaaaagatatgaagaaagaattgcagacgatccatgaccagctgcagcacctg
agcaacgctatcaggcaggttaaaatgaaaaaggaataccagcagaaaaagatggaaaag
ggtaccagccccaaaaaacccagcatcaccctcagtgcctaccagagcaagtgcatccag
accgtcctgaaagaagagggagaacacataagggaaatggtaaaacagatcaatgacatc
agaaaccacgtgaacttctaa
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