Tyto alba (Barn owl): 104357957
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Entry
104357957 CDS
T07816
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03013
Nucleocytoplasmic transport
tala03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104357957 (SRRM1)
03015 mRNA surveillance pathway
104357957 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104357957 (SRRM1)
03041 Spliceosome [BR:
tala03041
]
104357957 (SRRM1)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104357957 (SRRM1)
Spliceosome [BR:
tala03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104357957 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
104357957
NCBI-ProteinID:
XP_032859083
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEPTSNN
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRASATKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRGSPT
AKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASP
QRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPS
PTRSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHK
KEKAAAAAAAAAVAAADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRK
AQVSPPS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagcgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagagataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaagacgcaaatcaaggtctccttcc
cctcgaaggaggtcgtcgcctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcgactcct
gagccagaaccttctgtgaaaccaaaggagactgttgttcaagagccaacttcaaacaat
gatatcccaaaagctcctaaaccagaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaagagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaagatctcgatcacgttctccgtctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggcgaccgagcccaagacga
cggccatctccaaggaggaggagccctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatctggcagtagc
tcttcctcctcctcctcgcgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacgcgtaggctctctccttccgccagccctcctaggcggagg
cacagaccatccccgccagcaagtccacctccaaaaccacgcaggtctccgacaccccag
cagtcaaatcgtgcaagaaaaagccgtggctctgtttcgcctagcagagcgtcagcaacc
aaacataagagtactgaaaaaagagaatctccttcgccagcaccaaaaccaaggaaagca
gaactgtctgaatcagaagaagataaaggaggtaaaatggctgcagcagactctgttcaa
cagaggcgtcagtacaggcggcagaatcaacagtcttcatctgattctggttcttcatct
tcatctgaagaggaaagacctaaaaggtccaatgtgaagaatggggaggttggtagacgc
cgacgccattcacattcacgcagtccatcaccgtctccacgaaaacgacagaaggagtcc
tcccctcggatgcagatggaaaagaggtggcaatcgccagtgatgaaaagcaggaggagg
agaagtccatcgcccccaccagccaggcggcgacgctcgccgtcacctgccccccctccc
aggcggcggcggtccccttcattacctcgccgaaggtctccatcaccacccccacgcaga
cgctcgccttctccacggagatactctccaccgatacagagacgatattctccttctcca
ccacctaagagaagaacagcttctcctcctcccccacctaaacgaagggcatcaccttct
ccacagtcgaaacgcagagtctcccattcaccaccgccaaaacaaaggggctcaccgacc
gcgaaaaggcgttcaccttccatatcttctaaacacaggaaggggtctcctcccagtagg
tccaatcgggaaacacgttctccaccacaaaacaaaaggcattcaccttcaccacggcct
agagcttctcatacctctgcaagcccaccaccaccacgaaggggagcttcagcttcaccc
cagcgaagacagtctccatctccaagcactagacccatcaggagggtgtcaagaacacca
gaacctaagaagacaaaggcttccacaccaagtccacgatctgcgaggcgagtgtcgtct
tcacggtctgcgtcaggatcacctgagccagcaccgaaaaagcatcaaggacctccatct
cccactcggtcccgctctccctctgcaaactggtcacctgcaaaaaaggctaaaagccca
actcagagcccatcacctgcaaggaattcagatcaagaagggggtggaaaaaagaagaag
aaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaaacataag
aaggagaaggctgcggcggctgcagcagctgctgccgtggctgcagcagataccacctca
gcacaggaagaccaggaagcagagacagaacccaagaaggagacggaaagtgaaccagaa
gacaaccttgatgatctagaaaaacacctgcgagagaaggcactgaggtcaatgaggaag
gcgcaagtgtcaccaccatcctag
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