Tyto alba (Barn owl): 104359330
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Entry
104359330 CDS
T07816
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104359330 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104359330 (CNOT1)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104359330 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104359330 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
104359330
NCBI-ProteinID:
XP_042653327
LinkDB
All DBs
Position
Unknown
AA seq
2384 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVIK
LSKVQEVIFGLALLNSFSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLDFKVVTYE
LDHPGFQIRDSKGLHIVVFGIQRGLGMEVFPVNAIYRPWKHAEGQLSFIQHSLINPDIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDSLAGMASL
SLGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTQNQTTGFSGIGGLSSQLPVGG
LTTGSLTGIGTGALGLPAVNNDPFVQRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQRDMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQQAWATDDVAQIYDKCMTEL
EQHLQSIPHTLAMNPQAQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADAD
LLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNM
QQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSR
GNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREW
VNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYR
AQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVG
VLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAP
GFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILY
KGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKV
DMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNI
QLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIAN
QLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaataggcacggt
cccgaggcagacaggcatttactacgctgtctattctcgcacgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcaatttctgatccaggagtgtgcgtcg
ctgattacaaaaccaaactttatctcgacgctgtcctacgccattgacaatccgttgcac
tatcagaagagtctaaagccttcaccccatttatttgcccaattgagtaaagtcatcaaa
ttaagtaaagttcaagaggtgatttttggtctcgctttactgaactctttcagctcagat
ttacgtggttttgctgcccagtttatcaaacagaaactcccggatcttttgcgctcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctgcaccttctcctctcccatctcctttttgggcagaagggagcctttggggtaggacag
gaacagattgacgctttcctcaaaacattacgtagagattttccccaggagcgttgccct
gtggtgcttgcaccacttctataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggagagttctctggcagatttcatgcaa
gaagttggctatggcttttgtacaagtgtcgaagaatgtcgcaacataatcatgcagttt
ggtgttcgggaagtcacggctgcccaggttgccagggttttggggatgatggctcggact
cattcggggttgacagatggtattccattacaatctatttcggctcctggcagtgggatt
tggagtgatgggaaagataaaagtgatggagcacaagcccatacctggaatgtggaggtc
ttaattgatgttcttaaagagctgaatcctagcctggacttcaaagtagtaacctatgaa
ttggaccatccaggatttcagattcgtgacagcaagggcctgcatattgtagtgtttggc
atccagagagggctgggcatggaagtttttccagttaatgccatatacagaccttggaag
catgcagagggccagctctccttcattcaacattccctcataaaccctgacatcttctgt
tttgctgactacccttgtcatactgttgccacagacatcctgaaagcaccaccagaggat
gacaatcgagaaattgctacatggaagagcctggatttgattgaatctctgttacgattg
gcggaagtgggacagtatgagcaggttaagcagctcttcagttttcctatcaagcattgc
ccagatatgttggtattggccttactgcagatcaacacgtcctggcataccttgcgccat
gagctcatctccacactcatgccaattttccttggcaaccatcccaactctgccatcatt
ttgcactatgcatggcatggacagggtcagtctccttcgattcgtcagcttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgaccaggcaaaattgtcacgtatt
cttgatgtggcgcaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcctgtatgacgttctta
aagagaagatgtccatctatcctgggtggccttgccccagaaaaagatcaacccaaaagt
gctcagcttcctccagaaaccttggcgacgatgttggcatgtctgcaagcttgcgctggg
agtgtttctcaggagctgtcagagacgatcctcaccatggtagctaactgcagtaatgtc
atgaacaaggctagacagccaccgcctggagtcatgccgaaaggacgcccgcccagcgct
agcagcttggatgccatatctcctgtacagattgactcgcttgcaggaatggcatctctt
agtttaggtggctcagctgctcctcatacccagagcatgcaaggcttccctccaaacttg
ggctctgcattcagtactcctcagtcaccagcaaaagcattcccccctctttccacccaa
aaccagacaacaggtttcagtggcatcggaggactctcttcacagcttccagtaggtggt
cttactacgggtagtctgactggcataggaactggagccctgggccttcctgcagtgaac
aatgacccattcgtgcaaaggaagctgagcacatctggactgaaccagcctacattccag
cagagtaagatgaaaccttctgacttatctcaggtgtggccagaggctaatcagcacttt
agcaaagaaatagatgatgaggcaaacagctacttccagcgtatttacaaccatccacca
catccaaccatgtctgtagatgaggtcttggaaatgctgcagaggtttaaggactccaac
attaaacgggaacgagaagtgtttaactgtatgctgaggaacttgtttgaggaataccgt
ttctttccccagtacccagataaagagctgcacataacagcctgcctctttggtgggata
atagagaaaggactggttacttatatggcattgggcctggccctgcgctatgttcttgaa
gccttacgaaagccttttgcatccaaaatgtactattttggtattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcac
tttatacagttcccgcatcatttacaggagtacatagaatatggacagcaatccagagat
cctcctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaggct
caggcccaggcccaagttccagcaaaagctcctcttgctggccaagtcagcactatagta
accacctcaaccaccaccactgttgcaaaaaccattacaatcacccggccaactggagtc
agcttcaagaaagacgtgccgccttccattaatactaccaacattgatacgctgttagta
gcgacagaccaaactgagagaattgtggaacctccagaaaatgtccaggaaaaaattgct
ttcatcttcaataatctgtctcagtcaaatatgacacagaaggttgaagaattgaaggaa
accgtgaaagaagaattcatgccttgggtgtcacagtatcttgtcatgaagagagtcagt
attgagcctaattttcacagcttatattcaaacttccttgatacgctgaagaatccagag
tttaataaaatggttctgaatgaaacctacagaaatatcaaggtgctactgacatcagat
aaagctgcagccaacttctcagaccgttccttgttgaagaaccttggtcactggctggga
atgattacgctggctaaaaataagcccatcttgcacacggatttggatgtgaaatcgcta
ctactggaagcgtatgttaagggacagcaggagttgctttatgtagtgccatttgttgcc
aaagtcttagaatccagtgtcaggagtgtggtcttcaggcctccaaacccgtggacaatg
gccattatgaatgttttagctgagctacatcaagaacatgatctaaaattgaatctgaag
tttgagattgaggtgctctgcaagaatcttgcactagacatcaatgagctgaaacctgga
agtctcctgaaagataaggatcgtctgaaaaatctggatgagcagctttctgctccaaag
aaggatgtgaagcaaccagaagagctgccacccatcacaacaactactgcttctacaact
ccagctaccagcaccacttgtacagccacggttcctccacagccccagtacagttatcac
gacatcaacgtctattctttagggggattggctccacatattaccttaaatccaacgatt
ccgctatttcaagcccacccgcagctgaagcagtgtgtgcggcaggcgatcgagcgagca
gtgcaagagcttgtccatccggtggtggatcggtccattaagattgccatgacgacttgt
gagcagatagtcaggaaggactttgcactggattcagaggagtcacgaatgcgtgtggcc
gcacatcatatgatgcggaacctgactgctgggatggccatgattacctgcagggaacct
ttgctgatgagcatagctacgaacttgaaaaatagttttgctactgcactgagggcagct
tccccacaacagagggacatgatggagcaagcagccgcccagttagcgcaggacaactgt
gagctagcatgctgctttatccagaagacagctgtggaaaaggcagggcctgagatggac
aagaggctcgcaactgaatttgagcttagaaaacatgctagacaagagggtcgtcggtac
tgtgatcctgttgtgttaacttaccaggctgagaggatgccagaacagatcaggttaaag
gttggaggtgtggacccaaaacagctggctgtttatgaagagtttgcacgcaatgtccct
ggcttcttgcctaccaatgacttaactcagcctacaggattcttggcccagcctatgaag
cagcaagcttgggctacagatgatgtagcacaaatctacgacaagtgtatgacagaactg
gagcaacacctgcagtccatcccacacaccctggccatgaatcctcaagctcaagcattg
cgcagcctcttagaggctgtggtagtggctcgtaactcccgtgatgctattgctgcactt
gggctactgcagaaggctgtagaaggcttactggatgccaccagcggggcagatgctgac
ctcctgcttcgctatcgcgagtgtcatctgcttgtgctgaaggctctgcaggacggccgc
gcatatggatctccgtggtgtaataaacaaattactcggtgcctgattgaatgcagagat
gagtacaagtacaacgtggaagctgtggagctgctaatccgcaatcaccttgttaacatg
cagcagtatgaccttcacttggctcagtcaatggagaatggcttgaactacatggctgtg
gcatttgccatgcagttggtaaagatcctgttggtggatgagagaagtgtcgcccacgta
acggaggcagatctgttccacacaatcgagacgctcatgaggattaatgctcattccaga
ggaaacgccccagaaggattaccccagctgatggaagtggtccgatcaaactacgaagca
atgattgaccgtgctcacggaggtcccaatttcatgatgcattcgggaatttcccaagcc
tctgagtatgatgatccaccaggtctgagagagaaggcagaatacctgctgagggagtgg
gtgaacctctaccattcagctgcagcgggccgtgacagtaccaaagcattctctgcgttt
gttggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaacagat
gacttgatcacccgatttttccgtctttgcactgaaatgtgtgtcgagatcagctatcgt
gctcaggctgagcaacagcataatcctgctgccaaccccactatgattcgagccaagtgc
taccacaatctggatgcctttgtgcgacttattgcactgctagtgaagcactctggggag
gcaaccaacacagttacaaagatcaacctcctgaataaggttcttggtattgtggtggga
gttcttctgcaagaccatgatgttcggcagagtgagtttcagcaacttccttaccatcgc
attttcatcatgttgctgttggaattaaatgctcctgagcatgtgctggagaccatcaac
ttccagacactcacagctttctgtaacacatttcacatcctgaggcctacaaaagctcca
ggttttgtttatgcctggctggaactgatctcccatcggatatttattgcaagaatgctg
gcacatacaccacagcagaagggttggcctatgtatgcacagttattgatcgatcttttc
aagtacttggctcctttccttagaaatgtggaactcaccaaacctatgcaaattctttac
aagggcactctgcgtgtgttgctggtcttgttgcatgatttcccagaatttctttgtgac
taccactatgggttctgtgatgtgatcccacctaactgtattcagttaaggaatctgatc
ctgagtgccttcccacggaacatgaggcttccagaccctttcacccccaatctaaaggtg
gacatgttaagtgagattaacattgctccacgaatactcacgaatttcactggagtgatg
ccacctcagtttaagaaagacttggattcctatctcaaaacccgttctccagtcactttt
ttgtctgatttgcgcagcaacctacaagtatcaaatgaacccggcaaccgctacaacatc
cagctgattaatgcactggtgctctacgtaggtacccaagctattgcgcacattcacaac
aaaggcagcacaccctctatgagcaccattacccactcagctcacatggacatcttccag
aatctggccgtagacctggacacagaaggccggtaccttttcctgaatgcaattgccaat
cagctgcgataccccaacagtcacacccactacttcagttgcaccatgctgtacctgttt
gcagaggccaacactgaggctatccaggagcagatcactagggttctcttggaacgactg
attgtaaataggcctcatccctggggtctccttattactttcattgagctgataaaaaat
ccagcatttaagttctggaaccatgagtttgttcactgcgctccagaaattgagaagttg
ttccagtcagttgcacagtgctgcatggggcagaagcaggcccagcaagtaatggaaggg
actggtgccagttag
DBGET
integrated database retrieval system
