KEGG   Tyto alba (Barn owl): 104364139
Entry
104364139         CDS       T07816                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
tala  Tyto alba (Barn owl)
Pathway
tala03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tala00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104364139 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tala03019]
    104364139 (NDC1)
Messenger RNA biogenesis [BR:tala03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104364139 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup GP41
Other DBs
NCBI-GeneID: 104364139
NCBI-ProteinID: XP_032864681
LinkDB
Position
Unknown
AA seq 672 aa
MEAGAGRQQALLRQVLGWRVAAAVAWSVLLLPVCTGAFVVLSGFDPFHPVRWISNSFNDL
YTSYVIFCILLMSVVILVISIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSVVHAVMG
MLVAWCAAVMTKGKFQFLAVPCTPSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLLYL
INNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWISTT
MDLHIDSKLHALDALAGLLDLSLFYHAWLCGVFLLITWHIAWLLFKIYATETHHFPVQPT
FAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLITQQEAAAANGRVKQPARELKLSPHAPGAVVTEDMSLQSQRSNIIS
RASMSSLVKSSLTPLKTQSGSDVCSPFSSPALNCKMGILDVNSPWHGSIQSPHVMRRGPK
LWTSGSDLQMNGSYQESFPMLSASRVGSEAVQPRFIYTWLQNKQEQIKNFLSKRALIMYF
FSKHPETSIQAVFSDTQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVV
DRYFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEH
KKRLQQFLEYKE
NT seq 2019 nt   +upstreamnt  +downstreamnt
atggaggcgggggcggggcggcagcaggcgctgctccgccaggtgctgggctggagggtg
gcggccgccgtggcgtggtccgtgctgctgctgcccgtctgcaccggcgccttcgtcgtc
ctcagcggcttcgaccccttccacccggtgcgctggatctcgaattctttcaatgattta
tatacttcctacgtcatcttttgtatcctccttatgtctgtggtgatactagtaataagc
atcttcaacgttgaattttatgcagttgtgccatcaataccatgctctcgattagcactg
ataggaaaaattattcaccctcagcaagttatccattcagttgttcatgctgtaatggga
atgttggttgcttggtgcgctgcagttatgacaaaagggaagttccagtttcttgctgtg
ccctgtacgccttcagaaagcctagatgatgctgttcctcagatgtgcctaaacgagtat
cacctcttttttctactttctggagctttcatgggatacagttatagtcttttatatctt
attaacaatatgaattatttgccgtttccaatcatacagcaatacaagtacttacgtttc
agaagatctttgcctctcctcattaaacacagttgtgtggaatcgctatattttgttaga
aacttctgtgtcacatactacttttttggttatatccctaaggtgtggataagtaccaca
atggatcttcatatagacagtaaattgcatgctcttgatgctttagctggtttattggat
ctctccttgttttaccatgcctggttatgtggcgtatttcttctgattacctggcatatt
gcatggttactcttcaaaatctatgctacagagacacatcattttcctgtccagccaact
tttgctgaggagacagatcagtgcctgcctaaaatcctgaacagcaatcctcccctaatc
atcaagtttttagccttacaagacttgatgttactttcccaatattctcctgttcgacga
caagaagtctttagccttagtcagccaggtgggcacccgcataactggactgcaatatca
agggagtgcttgagtcttctgagtgatctgacccagaggctgatcacacagcaggaagca
gcagcagcaaatgggagagtgaagcagccagcacgagagctgaaactatctccacacgct
ccaggagctgttgtgacagaagacatgtctttgcagtcacagaggtctaacatcatttcc
agagcttccatgtcttcactggttaaatcatccctaacgcctttaaagacacagtctggg
tctgatgtttgctcgccttttagttcacctgctttaaattgcaagatgggaattctggat
gtaaactccccttggcatgggtcaatccaaagtcctcatgttatgagaagaggaccaaag
ctgtggacatcaggttcagatctgcaaatgaatggttcctaccaagaatccttcccaatg
ctttctgcttcaagggtgggaagtgaggcagtacagccaagatttatttacacctggctt
cagaacaagcaagaacagataaaaaacttcttgtcaaaacgagcgctgataatgtatttc
ttcagcaagcacccagaaacctccatccaagctgtcttctctgacacccaaatgcacatc
tgggctttggaaggtctgtctcatttggtagcagcttcctttactgaagaccaatttgga
gttgtccaaactacactgccagctatcctgaatactttactgactcttcaggaggttgta
gacagatatttcaaactgcctcatgtttctagcaagccccccaggatttcaggaagtctg
gtggacacatcctacaaaacactacgatttgcacttagagcatctctgaaaacagcactg
taccggataactactgtcttcggagaacacttgaatgcagtgcaagtgtctacagaacat
aagaaaagacttcagcaattcttggaatacaaagaataa

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