Tyto alba (Barn owl): 104364139
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Entry
104364139 CDS
T07816
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
tala
Tyto alba (Barn owl)
Pathway
tala03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104364139 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tala03019
]
104364139 (NDC1)
Messenger RNA biogenesis [BR:
tala03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104364139 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
104364139
NCBI-ProteinID:
XP_032864681
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MEAGAGRQQALLRQVLGWRVAAAVAWSVLLLPVCTGAFVVLSGFDPFHPVRWISNSFNDL
YTSYVIFCILLMSVVILVISIFNVEFYAVVPSIPCSRLALIGKIIHPQQVIHSVVHAVMG
MLVAWCAAVMTKGKFQFLAVPCTPSESLDDAVPQMCLNEYHLFFLLSGAFMGYSYSLLYL
INNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWISTT
MDLHIDSKLHALDALAGLLDLSLFYHAWLCGVFLLITWHIAWLLFKIYATETHHFPVQPT
FAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAIS
RECLSLLSDLTQRLITQQEAAAANGRVKQPARELKLSPHAPGAVVTEDMSLQSQRSNIIS
RASMSSLVKSSLTPLKTQSGSDVCSPFSSPALNCKMGILDVNSPWHGSIQSPHVMRRGPK
LWTSGSDLQMNGSYQESFPMLSASRVGSEAVQPRFIYTWLQNKQEQIKNFLSKRALIMYF
FSKHPETSIQAVFSDTQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQEVV
DRYFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVSTEH
KKRLQQFLEYKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggggcggggcggcagcaggcgctgctccgccaggtgctgggctggagggtg
gcggccgccgtggcgtggtccgtgctgctgctgcccgtctgcaccggcgccttcgtcgtc
ctcagcggcttcgaccccttccacccggtgcgctggatctcgaattctttcaatgattta
tatacttcctacgtcatcttttgtatcctccttatgtctgtggtgatactagtaataagc
atcttcaacgttgaattttatgcagttgtgccatcaataccatgctctcgattagcactg
ataggaaaaattattcaccctcagcaagttatccattcagttgttcatgctgtaatggga
atgttggttgcttggtgcgctgcagttatgacaaaagggaagttccagtttcttgctgtg
ccctgtacgccttcagaaagcctagatgatgctgttcctcagatgtgcctaaacgagtat
cacctcttttttctactttctggagctttcatgggatacagttatagtcttttatatctt
attaacaatatgaattatttgccgtttccaatcatacagcaatacaagtacttacgtttc
agaagatctttgcctctcctcattaaacacagttgtgtggaatcgctatattttgttaga
aacttctgtgtcacatactacttttttggttatatccctaaggtgtggataagtaccaca
atggatcttcatatagacagtaaattgcatgctcttgatgctttagctggtttattggat
ctctccttgttttaccatgcctggttatgtggcgtatttcttctgattacctggcatatt
gcatggttactcttcaaaatctatgctacagagacacatcattttcctgtccagccaact
tttgctgaggagacagatcagtgcctgcctaaaatcctgaacagcaatcctcccctaatc
atcaagtttttagccttacaagacttgatgttactttcccaatattctcctgttcgacga
caagaagtctttagccttagtcagccaggtgggcacccgcataactggactgcaatatca
agggagtgcttgagtcttctgagtgatctgacccagaggctgatcacacagcaggaagca
gcagcagcaaatgggagagtgaagcagccagcacgagagctgaaactatctccacacgct
ccaggagctgttgtgacagaagacatgtctttgcagtcacagaggtctaacatcatttcc
agagcttccatgtcttcactggttaaatcatccctaacgcctttaaagacacagtctggg
tctgatgtttgctcgccttttagttcacctgctttaaattgcaagatgggaattctggat
gtaaactccccttggcatgggtcaatccaaagtcctcatgttatgagaagaggaccaaag
ctgtggacatcaggttcagatctgcaaatgaatggttcctaccaagaatccttcccaatg
ctttctgcttcaagggtgggaagtgaggcagtacagccaagatttatttacacctggctt
cagaacaagcaagaacagataaaaaacttcttgtcaaaacgagcgctgataatgtatttc
ttcagcaagcacccagaaacctccatccaagctgtcttctctgacacccaaatgcacatc
tgggctttggaaggtctgtctcatttggtagcagcttcctttactgaagaccaatttgga
gttgtccaaactacactgccagctatcctgaatactttactgactcttcaggaggttgta
gacagatatttcaaactgcctcatgtttctagcaagccccccaggatttcaggaagtctg
gtggacacatcctacaaaacactacgatttgcacttagagcatctctgaaaacagcactg
taccggataactactgtcttcggagaacacttgaatgcagtgcaagtgtctacagaacat
aagaaaagacttcagcaattcttggaatacaaagaataa
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