KEGG   Tyto alba (Barn owl): 116961895
Entry
116961895         CDS       T07816                                 
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
tala  Tyto alba (Barn owl)
Pathway
tala04510  Focal adhesion
tala04512  ECM-receptor interaction
tala04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:tala00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116961895 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116961895 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116961895 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tala00535]
    116961895 (COL9A2)
Proteoglycans [BR:tala00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   116961895 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 116961895
NCBI-ProteinID: XP_042649882
LinkDB
Position
Unknown
AA seq 733 aa
MSPLLLLLLLLLLPRCPAVQSGLPPYLSAARRGHRRLLPATLAMAGCSPLLQLCLLLQAA
CLCLAQIRGPPGEPGPRGPPGPPGVPGADGIDGDKGSAGAPGSPGIKGEPGAPGPDGPPG
KPGIDGLTGAKGEPGPVGGPGLKGQPGLPGPPGLPGPSLPGPPGLPGQVGLPGEIGVLGP
KGDPGPDGPRGPPGPPGKPGPPGHIQGLEGSADFLCPTSCPPGPKGPQGLQGLKGHRGRP
GALGEPGKQGSQGPKGDAGVSGEQGVPGPPGPQGLRGYPGMAGPKGETGPAGYKGMVGSI
GAAGRPGKEGPKGPPGAPGEKGDLGGRGIRGPQGDIGPKGENGLPGIDGKDGTPGIPGVK
GGVGQAGRPGVPGHRGQAGLPGQPGSKGGPGDKGEAGARGHPGVTGAPGQIGEPGPRGEQ
GPQGVPGMKGDRGERGLVGPPGEQGKTGPKGEQGPPGIPGPQGLTGVKGDKGSPGKTGPK
GNSGDTGVHGLAGLKGEKGESGEPGPKGQPGIRGELGFPGPSGDAGAPGVRGYPGPPGPR
GLVGERGVPGMPGQRGVAGRDASDQHIVDVVLKMLQEQLAEVAVSAKRAALGGVGAMGPP
GPPGPPGPPGEQGPHGPMGPRGVPGILGAVGQIGNVGPKGKRGEKGERGEAGRGHPGMPG
PPGIPGLPGIPGHALDGRAGERGLPGSPGEAGRPGLPGPAGLPGFCEPAACLGASAYATA
RLTEPGAVKGPVY
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgagccccctcctcctcctcctcctcctcctcctcctcccccggtgtccggctgtgcag
tcggggctgccgccgtacctgagcgcagccagacgaggccaccgccgcttgctgccagcc
accctcgccatggccggctgctcccccctgctccagctctgcctcttgctccaagccgcc
tgcctctgcctggcccaaattcgagggccgccgggagaacctggcccacgagggcccccc
ggtcccccaggagtgccaggagcggatggcattgacggtgacaaaggctctgctggagcc
cccgggtccccgggtatcaagggggaacccggagcccccggtccagacgggcccccaggg
aagccgggcatcgacggcctgacgggagcgaagggggaaccggggcccgtcggcgggcca
ggacttaaaggccagcccggactcccagggccaccggggctccccggtccttcgctgcca
ggaccacccgggcttccaggccaggttgggcttcccggagagatcggagtgctgggaccc
aagggtgaccctggacccgacggcccacggggtcccccaggccctccagggaaacccggc
cccccaggacacatccaaggactggaaggcagcgctgatttcttgtgcccaaccagctgc
ccaccaggtcccaagggccctcagggactgcagggactgaagggacacagaggccgcccc
ggcgccctcggggagcccggcaagcagggcagccagggccccaagggtgatgctggcgtc
tccggagaacaaggtgtcccaggccctccgggaccacaggggctgaggggttaccccggg
atggcaggacccaagggtgagacgggtcctgctggttacaaggggatggtcgggagcatc
ggagcggcggggcggccgggcaaggaaggccccaagggaccacctggggcccctggtgag
aagggagatctgggtggccgtggcatcaggggcccccaaggagacatcggccccaagggg
gagaatggtctcccgggcatcgatggcaaagatggcaccccgggcatcccaggcgtgaag
ggtggcgtggggcaggccggccgcccaggagtgccgggacaccggggacaagctggtttg
ccgggccagccgggaagcaaaggtggcccaggagacaagggtgaagcgggtgctcggggc
caccccggtgtcaccggtgccccgggacagatcggtgagcctggacctcggggtgagcag
ggaccgcagggtgtccccgggatgaagggtgaccggggcgagcgcggcctcgtgggcccc
cccggcgagcaggggaaaacggggccgaagggggagcagggtccaccggggatcccagga
ccccaaggcttgacgggagtcaagggggacaagggctccccagggaaaaccggccccaaa
ggcaattctggagacacaggcgttcacggcctcgcggggctgaagggagagaagggtgaa
tcgggcgagccagggccgaaggggcagccaggcatccggggcgagctcggcttccccggc
ccctcgggggacgcaggcgcacccggcgtgcgaggctacccgggaccccccggcccgcga
ggactcgtcggggagcgcggcgtgccggggatgcccggccagaggggcgtagcgggccgg
gacgccagcgaccagcacatcgttgacgtggtcctgaagatgctgcaagagcagctggcg
gaggtggcggtcagtgccaagagagctgccctgggtggagtcggtgccatgggacccccg
ggaccccccggtccccccgggccgcccggtgagcagggcccgcacggacccatgggacct
cgaggtgtccccggcatcctgggtgctgtcgggcagattggcaacgtaggacctaaaggg
aagcgaggcgagaagggtgagcggggagaagctggccgcggccacccgggcatgccaggt
cccccggggatcccaggtctccccggcatccccggccacgcactcgatggcagggctgga
gagcggggcttgccgggctcgccgggagaggctggccggccgggcttgcccggtcccgct
ggcttgccgggtttttgcgagccggccgcttgcctgggagcctcggcgtacgccactgcg
cgcctgacagagccgggggccgtcaagggacccgtctactga

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