Tyto alba (Barn owl): 116961895
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Entry
116961895 CDS
T07816
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
tala
Tyto alba (Barn owl)
Pathway
tala04510
Focal adhesion
tala04512
ECM-receptor interaction
tala04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tala00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116961895 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116961895 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116961895 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tala00535
]
116961895 (COL9A2)
Proteoglycans [BR:
tala00535
]
Extracellular matrix (ECM) proteoglycans
Others
116961895 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116961895
NCBI-ProteinID:
XP_042649882
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MSPLLLLLLLLLLPRCPAVQSGLPPYLSAARRGHRRLLPATLAMAGCSPLLQLCLLLQAA
CLCLAQIRGPPGEPGPRGPPGPPGVPGADGIDGDKGSAGAPGSPGIKGEPGAPGPDGPPG
KPGIDGLTGAKGEPGPVGGPGLKGQPGLPGPPGLPGPSLPGPPGLPGQVGLPGEIGVLGP
KGDPGPDGPRGPPGPPGKPGPPGHIQGLEGSADFLCPTSCPPGPKGPQGLQGLKGHRGRP
GALGEPGKQGSQGPKGDAGVSGEQGVPGPPGPQGLRGYPGMAGPKGETGPAGYKGMVGSI
GAAGRPGKEGPKGPPGAPGEKGDLGGRGIRGPQGDIGPKGENGLPGIDGKDGTPGIPGVK
GGVGQAGRPGVPGHRGQAGLPGQPGSKGGPGDKGEAGARGHPGVTGAPGQIGEPGPRGEQ
GPQGVPGMKGDRGERGLVGPPGEQGKTGPKGEQGPPGIPGPQGLTGVKGDKGSPGKTGPK
GNSGDTGVHGLAGLKGEKGESGEPGPKGQPGIRGELGFPGPSGDAGAPGVRGYPGPPGPR
GLVGERGVPGMPGQRGVAGRDASDQHIVDVVLKMLQEQLAEVAVSAKRAALGGVGAMGPP
GPPGPPGPPGEQGPHGPMGPRGVPGILGAVGQIGNVGPKGKRGEKGERGEAGRGHPGMPG
PPGIPGLPGIPGHALDGRAGERGLPGSPGEAGRPGLPGPAGLPGFCEPAACLGASAYATA
RLTEPGAVKGPVY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctcctcctcctcctcctcctcctcctcctcccccggtgtccggctgtgcag
tcggggctgccgccgtacctgagcgcagccagacgaggccaccgccgcttgctgccagcc
accctcgccatggccggctgctcccccctgctccagctctgcctcttgctccaagccgcc
tgcctctgcctggcccaaattcgagggccgccgggagaacctggcccacgagggcccccc
ggtcccccaggagtgccaggagcggatggcattgacggtgacaaaggctctgctggagcc
cccgggtccccgggtatcaagggggaacccggagcccccggtccagacgggcccccaggg
aagccgggcatcgacggcctgacgggagcgaagggggaaccggggcccgtcggcgggcca
ggacttaaaggccagcccggactcccagggccaccggggctccccggtccttcgctgcca
ggaccacccgggcttccaggccaggttgggcttcccggagagatcggagtgctgggaccc
aagggtgaccctggacccgacggcccacggggtcccccaggccctccagggaaacccggc
cccccaggacacatccaaggactggaaggcagcgctgatttcttgtgcccaaccagctgc
ccaccaggtcccaagggccctcagggactgcagggactgaagggacacagaggccgcccc
ggcgccctcggggagcccggcaagcagggcagccagggccccaagggtgatgctggcgtc
tccggagaacaaggtgtcccaggccctccgggaccacaggggctgaggggttaccccggg
atggcaggacccaagggtgagacgggtcctgctggttacaaggggatggtcgggagcatc
ggagcggcggggcggccgggcaaggaaggccccaagggaccacctggggcccctggtgag
aagggagatctgggtggccgtggcatcaggggcccccaaggagacatcggccccaagggg
gagaatggtctcccgggcatcgatggcaaagatggcaccccgggcatcccaggcgtgaag
ggtggcgtggggcaggccggccgcccaggagtgccgggacaccggggacaagctggtttg
ccgggccagccgggaagcaaaggtggcccaggagacaagggtgaagcgggtgctcggggc
caccccggtgtcaccggtgccccgggacagatcggtgagcctggacctcggggtgagcag
ggaccgcagggtgtccccgggatgaagggtgaccggggcgagcgcggcctcgtgggcccc
cccggcgagcaggggaaaacggggccgaagggggagcagggtccaccggggatcccagga
ccccaaggcttgacgggagtcaagggggacaagggctccccagggaaaaccggccccaaa
ggcaattctggagacacaggcgttcacggcctcgcggggctgaagggagagaagggtgaa
tcgggcgagccagggccgaaggggcagccaggcatccggggcgagctcggcttccccggc
ccctcgggggacgcaggcgcacccggcgtgcgaggctacccgggaccccccggcccgcga
ggactcgtcggggagcgcggcgtgccggggatgcccggccagaggggcgtagcgggccgg
gacgccagcgaccagcacatcgttgacgtggtcctgaagatgctgcaagagcagctggcg
gaggtggcggtcagtgccaagagagctgccctgggtggagtcggtgccatgggacccccg
ggaccccccggtccccccgggccgcccggtgagcagggcccgcacggacccatgggacct
cgaggtgtccccggcatcctgggtgctgtcgggcagattggcaacgtaggacctaaaggg
aagcgaggcgagaagggtgagcggggagaagctggccgcggccacccgggcatgccaggt
cccccggggatcccaggtctccccggcatccccggccacgcactcgatggcagggctgga
gagcggggcttgccgggctcgccgggagaggctggccggccgggcttgcccggtcccgct
ggcttgccgggtttttgcgagccggccgcttgcctgggagcctcggcgtacgccactgcg
cgcctgacagagccgggggccgtcaagggacccgtctactga
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