Temnothorax americanus: 143898064
Help
Entry
143898064 CDS
T11456
Symbol
Hpr1
Name
(RefSeq) THO complex 1-like protein Hpr1 isoform X1
KO
K12878
THO complex subunit 1
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143898064 (Hpr1)
09122 Translation
03013 Nucleocytoplasmic transport
143898064 (Hpr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143898064 (Hpr1)
03041 Spliceosome [BR:
tame03041
]
143898064 (Hpr1)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
143898064 (Hpr1)
Spliceosome [BR:
tame03041
]
Complex C
Other components
EJC/TREX
143898064 (Hpr1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143898064 (Hpr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
143898064
NCBI-ProteinID:
XP_077263265
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAMFEVLRKDYSDYLQQHFKLSDVSLFQKKCVERCANDSDRKVAIDQALRDSLLAVLTEN
ASGNVRSLELYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWK
EDLFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NHTEFGLEKAEGDNLDQITKDDDKSENKIPIDYNLYRKFWALQDFFRNPNQCYNKIHWKV
FSAHASNVLSAFASFKLEEQRSYPTTCIKMDTSMEGPYKETHYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKTTTDQVYTLLT
ETPPDGPTFAETVKNILKREEHWNAWKNEGCPPFKRPTSDVTDEEPRKPRRSRRRIGDVI
RDAQAVGKYHMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDD
KYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDVKL
ETEETPPSESTDQEFNEDVLKQESEQVDAESADVKARKLNKVTPEMVAKLSESLKNDWKK
LATKFGYTNDEIAFFQSKTTPYEQCKTMLEIWAEEDEDASVENLAYILEGLKYTEALAVL
KS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttcgaagtgttgaggaaggactatagcgattatctgcagcagcatttcaag
ctgtcggacgtctcgttgtttcaaaagaagtgcgtcgaacgttgtgcgaatgacagcgac
agaaaagtggcgatcgatcaggcgctgcgtgactcgttgctggccgtactgacggaaaac
gcttcgggtaacgtgcgctccctcgaattgtacatcacgttctgtatagagctatgcagg
aaggatctcgcgacggcgagtatgccggtgatgctactgggcgatatctttgactcgatg
acgctggacagatgcgaacagttgtttaccttcgtggagaacaacgtcaccgtgtggaag
gaagatctgttttttactgcctgcaagaataacttattgagaatgtgcaatgacttactg
aggagattgtcgcgttcgcaacaaacggtattttgtggcagaattctactgtttctcgca
aagttctttcctttctccgagagatccggcttgaatatcgttagcgaattcaacctggaa
aatcacacggaatttggcttggaaaaagcagaaggagacaacttggatcagataacgaag
gacgacgacaagtcagaaaacaagataccaattgattataatttgtacagaaagttttgg
gctcttcaagatttcttcagaaatccgaatcagtgttataataaaatacactggaaggtg
ttttcagctcacgcatctaatgtgctgtcagcatttgcttcctttaaattggaggagcaa
cgtagttaccctacaacatgcatcaagatggatacttctatggaaggtccttacaaagaa
acgcactattttgcaaaatatttgaccaatcaaaaattattggagttgcagctgtcagat
tccaatttcagacgatatgtattgctgcaatttctcattcttttccagtatctgaatagc
actgtaaaattcaaggccttccttgccagtggctatgagacaagtgagacacacgaactc
aagccggatcaagtggaatgggtgaagaccactaccgatcaagtttatactctactgacc
gaaacaccgcccgatggccccacgtttgcggagaccgtgaagaacatcttgaaacgcgag
gagcattggaatgcatggaaaaatgagggttgcccgccgtttaaacgaccgacatcggat
gttactgacgaggagccacgaaaaccgaggagatcgagacgacgtatcggtgatgtaatt
agggacgcgcaagcggttggaaaatatcatatgggaaacccagaactcactaaattatgg
aatctatgtccaaataatctcgaagcatgcaaatctaaggatagagattttcttccatcc
ttagaaacgtattttgaagacgctataatggaattggatcctgctgcgatggttgatgat
aagtataagaaggtgaacgacggtaactttggttggagagcgttaagactgttagcgaga
cgaagcccgcacttctttgttcatggcaattatcctataaataaattgcctgagtatctc
gagacaatgattaagaaaattgccaaggatcgtccacagactcagtccgatgtgaaattg
gaaaccgaggaaacaccgccgtcggaatctaccgatcaagaatttaacgaagacgtttta
aaacaggaaagcgaacaggtcgatgccgaaagcgccgacgtgaaagcaagaaagttgaat
aaagtcacaccggaaatggtggcgaaattatcagagagcctgaaaaacgattggaaaaaa
ttagcgacaaaatttggttatacaaatgacgagattgcttttttccaaagcaaaacaacg
ccgtatgaacaatgtaagactatgcttgagatatgggcagaagaggatgaagatgcatca
gtcgagaatttagcttatattttggaaggtttaaaatacacagaggcattggcggtgcta
aaatcttaa
DBGET
integrated database retrieval system
