Typha angustifolia (narrow-leaf cattail): 140758462
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Entry
140758462 CDS
T11061
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
140758462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140758462
03029 Mitochondrial biogenesis [BR:
tang03029
]
140758462
Membrane trafficking [BR:
tang04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
140758462
Others
Specific organelles associated proteins
Auto phagosome
140758462
Mitochondrial biogenesis [BR:
tang03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
140758462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
ATG16
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_SPT8
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_ACSF4
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Vps41
V_ATPase_I
Rab11-FIP3
Fur_reg_FbpB
Motif
Other DBs
NCBI-GeneID:
140758462
NCBI-ProteinID:
XP_072950743
LinkDB
All DBs
Position
3:join(5303264..5303265,5303353..5303485,5304618..5304799,5304899..5305094,5305785..5306810)
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AA seq
512 aa
AA seq
DB search
MTLDEIEIGKAAIKRAIRDLRKRHLLEEGAHAPAIDALTRPFAAQGLEWKEKAEKLEFEL
QQCYKAQSRLSEQLVVEVSEGRTSKTLLQEKELSVTTLQNEILQAREEISQLEESLDEKT
KALDLLINEHHLLKTQLEDVLLQLKEAKAENKSLIDRWMLEKMKDAEKLNEANAMYEEMV
QKLKASGIGGIQHHAQQEADGVIRRIEAGYVEVTEAAIPSTCKLTIHAHEGGCGSIVFQH
NSDKLISGGQDRTVKIWDTQTGALNSTLHGCLGSVLDLSVTSDNKYIIAACSSNNLYVWE
TSGGRIRHTLTGHVNKVCSVDTSRTSSCLVASASLDHTIKIWDLHTGYCTNTIMSSSNCS
ALSFMDKDTICSGHVDGNLRLWDIRNGKCSSQVAAHPQVTSVCISRTGNFVLTSGKDNVH
NLFDVRTLEVCGTFRAGGNKVVSTWGRSCISADESCIAAGSADGLVYVWSRRKNDIPSIL
EGHSASVLSCTWSDLGEPLASSDRNGNVYIWT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacattagacgagattgagattggaaaggcggcgataaagcgcgcaattagagatctc
aggaagcggcatttgctcgaggaaggagcccacgccccagcaattgatgcgctcacaaga
cctttcgctgcccaggggttagagtggaaagaaaaggctgaaaagctcgaatttgaactg
cagcaatgttacaaggctcagtcacgcctgtctgagcagctagtggtagaagtgtcggag
ggcagaacctcaaaaactcttcttcaagagaaggaattgtcagttacaactttgcagaat
gaaatcctgcaagcaagggaagaaatctcacaacttgaggagagtttagatgaaaaaaca
aaagctttagatcttctaataaatgaacaccacctacttaaaacacaactagaagatgtg
ctactgcaactaaaagaagctaaggctgaaaacaaaagtttgattgatcgctggatgttg
gagaagatgaaggatgcagaaaagcttaatgaggctaatgcaatgtacgaagaaatggtc
caaaagctaaaagctagtggtataggtggtatacaacatcatgcacaacaagaagctgat
ggtgtcatccgccgaattgaagcaggatatgtagaggttacggaagcagcaattccatcc
acatgcaagcttactatccatgctcatgaaggtgggtgcggatcaatagtatttcagcac
aactcagataagctgatcagtggtggacaggatcgaacagtcaagatatgggacacacaa
acaggggcgctgaactccactctccatggttgccttgggtctgtacttgatctttctgtt
accagtgataacaaatatataattgctgcctgcagctctaataacttgtatgtgtgggaa
acaagtggtggtcgaattcgtcacactctaactggtcacgtcaacaaggtatgttctgtc
gacacgagcaggacatccagttgccttgtggcaagtgcatcccttgatcatacaataaaa
atctgggatctccacaccggctactgcaccaacaccatcatgtcatcaagcaattgcagt
gccctttctttcatggataaagataccatttgctcaggtcatgttgatggcaacctgcgg
ttatgggatatccgaaatgggaaatgtagtagtcaggtagctgctcatccacaggttaca
tcggtatgcatatctcggaccggtaattttgttctaaccagcggtaaggataatgtgcat
aatctgttcgacgtaagaacactcgaagtgtgtggaaccttcagagctggtggaaacaag
gtggtatccacctggggaagatcgtgtatcagcgctgatgagagttgcattgcagctggg
tcagctgatgggcttgtctatgtgtggtcaaggcgaaagaatgatattccgagcattttg
gagggacactctgccagtgtgctttcatgcacctggagtgatcttggggaacctctcgca
tcatccgatagaaatggaaatgtttatatatggacctga
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