Typha angustifolia (narrow-leaf cattail): 140758713
Help
Entry
140758713 CDS
T11061
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
tang Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tang03036
]
140758713
Chromosome and associated proteins [BR:
tang03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
140758713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
140758713
NCBI-ProteinID:
XP_072951074
LinkDB
All DBs
Position
4:join(110003..110229,110793..110866,111027..111128,111401..111474,111809..111825,112262..112331,112409..112445,112637..112684,112766..112824,112905..112936,113028..113133,113648..113768,113858..113921,114157..114283)
Genome browser
AA seq
385 aa
AA seq
DB search
MAGRISISNPSDLLHKIKGHAQSPISSLLLLIATWIRTNSPAGFVRSLLEDLSSNRSPSI
ALDRYRNYCSDPSGNCSCSYDLPNDKEIISIEKKTHVRRLDVLLRVLVIIQQLLQENKHS
SKRDIYYTHPAVFAEQAVVDHAIIDICILLKCSRHHLNVVPVGKGLVMGWLRFAEAGRKN
CCIRSPNTAYPIPVCIEDVEDVVSVANYILVVEKESVFQRLANDKFCENNRCIVITGRGY
PDVPTRRFLHHLVEQLHLPVYCLVDSDPYGFDILTTYRFGSMQMAYDAKLMRVPEIQWLG
VFPSDFEEYHLPDRCRLHLTPEDKRKVEAMLSRCYLHKEAPQWRLELEIMLRKGVKFEIE
ALSVYSISFLSKEYIPVKIQHGKHM
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaggatctcgatttcgaatccctccgatctcctccacaagatcaaaggtcat
gcccaatcgccaatctcatctctccttcttttgatcgccacttggattcgaacgaattct
cctgcaggtttcgtccgatccctactcgaggatctctcaagcaatcgctctccttctatc
gccctagatcgctaccgcaactactgctccgatccctccgggaattgtagttgcagctat
gacttgcctaatgacaaagagataatctcaatcgagaaaaaaactcatgtgcgccgattg
gatgtgttactcagggtgctagtaataatacagcaactattacaagaaaacaagcacagt
tcaaaacgagatatatattacactcaccctgctgttttcgcagagcaagcagttgttgac
catgcaatcattgatatatgcatcctcttgaaatgcagccgccatcatcttaatgtggtt
cctgtgggaaaaggtttggtgatgggttggttaaggtttgctgaggctggcaggaaaaat
tgttgcattagaagtccaaacactgcatatcccattccagtgtgcattgaagatgtggaa
gatgttgtgagtgttgccaattacatacttgttgtggaaaaggagtcggtgttccagcgt
ttagcaaatgataaattttgtgaaaacaatcgctgcattgtcattacaggaagaggctac
ccagatgttcctacaagaagattcttgcaccatcttgtcgagcagctgcatttgccagtc
tattgcttggtagattctgatccttatggatttgatattctgacgacctacaggtttggt
tccatgcaaatggcctatgatgcaaagttaatgcgtgtgcctgagatacaatggcttgga
gtttttccttctgattttgaggaataccaccttccagatcggtgccgtcttcacttgacc
cctgaagataaaaggaaagtggaagctatgctatcgagatgctatttgcacaaggaagca
cctcaatggaggttggagttggagatcatgttgcggaaaggggtgaaatttgagattgaa
gccctgtccgtgtattcaatttcttttttgtcgaaggagtacatccctgtaaagattcaa
catggaaagcacatgtga
DBGET
integrated database retrieval system
