KEGG   Typha angustifolia (narrow-leaf cattail): 140760920
Entry
140760920         CDS       T11061                                 
Name
(RefSeq) nuclear pore complex protein NUP107
  KO
K14301  nuclear pore complex protein Nup107
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tang00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    140760920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tang03019]
    140760920
   03036 Chromosome and associated proteins [BR:tang03036]
    140760920
Messenger RNA biogenesis [BR:tang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     140760920
Chromosome and associated proteins [BR:tang03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    140760920
SSDB
Motif
Pfam: Nup84_Nup100
Other DBs
NCBI-GeneID: 140760920
NCBI-ProteinID: XP_072954112
LinkDB
Position
6:join(5083053..5083129,5085712..5086085,5091277..5091346,5099828..5099941,5100529..5100562,5100666..5100791,5103398..5103556,5105727..5105819,5105916..5106083,5107551..5107649,5111232..5111464,5111530..5111587,5117117..5117205,5117302..5117433,5120127..5120249,5121697..5121795,5121882..5122073,5122255..5122429,5122530..5122686,5123588..5123790,5125317..5125458,5125537..5125697,5125831..5125941,5126072..5126152)
AA seq 1089 aa
MEEKDSYPSYFNPENLSGREQFRRYRKRQSTSNVSPLVGTSVSKFSEARILYDGDNIQRR
PNAALLLEEIKQETDNFDIDVLDGPKVLNSAKRRAFVDSDAISEHNAGFGSVQKVASQSL
KSYKREDEVLPDGEESTFSLFASLLDSALQGLLSFGDLILQFEKTCRHVSESIRFGNTGR
HRMVEDKFMQHKARLLLDEAASWSLLWYLFGKGNEELPENLLLSPPTSHQEACQYVMTDH
TAQLCLRIVLWLEGLASESLDLEKKVRGSHVGSYLPSFGVWHHTQRFLKKKNDDPTVVQH
LDFDAPTREAARILSDDKKQDELLLEDIWMLLRAGRLEEACELCRSAGQAWRAASLCPFG
GLDLFPSVDAMHKNGKSRTLQAIELESGIGHQLRLWKWASYCASEKIAEQDGGRYEMAVY
AAQCSNLKRLLPICIDWESACWAIAKSWLDVQVDLGLSRFQQNRLELKPYADDMNESSSL
GSPSMLPSVGPESWPCHVLDQQPRDMPALLQKLHSSEIVHEDVSRACKEQHRRLEMSLMV
GDVAHLLDLLWSWISPSEDDQNILRPHGDPQMLRFGAHIVLVLRYLLDDEMKDAFREKLM
TVGDFILHMYAMFLFSKQHEELVGVYASQLARHLCIDLFVEMMELRLNSSVHIKHKLFLT
AVEYLPFALENESKACFEDIVERVLSRSRETKTNLYDGKLSDVAEQHRLQSLQKAMAIQW
LCFTPPSTIPNSQIISAKLLMRALMHSNILFREFALISIGRVPKMPVGAHTLLGFLAEPL
KQPKETLFSSEDNEVSENLQEFKDWQEYYSCDATYRNWLKIEMENAVVPPAKLSSEEKDR
AFAAARETLSSSLSLLLREGSPWLVSSQNIIYDSTEHHFLELHATAMLRLPSGECVAPDA
TLCTALTSALYSAVSEEDVLKHQLMVNVAISSRDNYCVEVVLRCLAMTDDVLGLYAVNDG
GLLATVMAAGFKGELHRFQTGVTMDISRLDAWYSDENGSVGNPATYIVKGLCRRCCLPEI
ILRCMQVSVFLSEAGDSQDYCDQLLDLVASSEMLQLFSQHQLEEFLLFERDRLLCKMEFE
EELSLDYPE
NT seq 3270 nt   +upstreamnt  +downstreamnt
atggaggagaaggattcgtatccgagctacttcaatcccgagaatcttagcggcagggag
caattccgtcgctacaggaaaagacaatctacctcaaatgtttcaccgctggtaggaacc
tcagtatcaaaattctctgaagcaaggattttgtatgatggtgataatattcaaagacgg
ccaaatgctgcactactccttgaagaaatcaagcaagagactgataactttgacattgat
gtcttggatggacctaaagtattgaattcagcaaaacgaagagcttttgttgatagtgat
gcaatctcggagcataatgctggctttggctcagttcaaaaagtggctagccagtcattg
aaatcttataagagggaagatgaggtgttgccagatggggaagagtcgaccttttcttta
tttgcatctcttcttgattcagcacttcaagggttgttgtccttcggtgatcttatttta
caatttgagaagacttgtcgtcatgtttctgagtcaatcaggttcggcaatactggaagg
caccgtatggttgaggacaaatttatgcagcataaagctcggctgttgcttgatgaggcc
gcttcctggtctcttctttggtacctctttgggaaaggaaatgaggaacttcctgagaac
ctacttttgtctccaccaacctcacatcaggaggcgtgtcaatatgttatgacagatcat
acagcacaattgtgtcttcggatcgtcctttggctagaaggtctagcctcggaatctctt
gatttggagaagaaggtgagaggatctcatgttggttcctatcttccaagttttggtgtt
tggcatcatacacagaggttcttgaagaaaaagaatgatgatcctactgtagtccaacac
ttggattttgatgctccaacacgtgaggctgctcgtatactttctgatgacaaaaaacaa
gatgagttacttctagaagacatttggatgctactaagggctggaaggctagaagaggca
tgtgagctatgccgttctgctgggcaggcatggagagctgcaagtctgtgcccatttggt
gggttagacttatttccttcggttgatgctatgcacaagaatggaaagtcaaggactttg
caagccattgaattggaaagtggcattgggcaccagttgcgtctttggaaatgggcatca
tattgtgcttcagagaaaattgctgagcaagatggtggtaggtatgagatggctgtatat
gctgcacagtgtagtaacttaaaacgcttgctaccgatctgtattgattgggagtcagct
tgttgggctattgcaaagtcctggcttgatgtccaggtggatttaggattaagccgcttt
caacaaaatcgacttgaattgaaaccttatgcagatgatatgaatgagtcgtcttcactg
ggaagcccatctatgttaccttcagttggtccagaaagttggccatgtcatgtccttgac
cagcaaccacgtgatatgccagctcttcttcagaaattgcactcaagtgaaattgtgcat
gaagatgtatctcgagcatgcaaagagcaacatcgacgacttgagatgagtctcatggtt
ggagacgttgcacatcttcttgaccttctatggtcatggatatcaccttcagaagatgat
cagaatattttgaggcctcatggtgatcctcaaatgttacgctttggggcacatatagtt
cttgttcttagatatctacttgatgatgaaatgaaggatgcctttagagagaagcttatg
actgttggcgatttcattcttcatatgtatgcgatgtttttgttttctaagcagcatgag
gaattggttggggtatatgcctctcagcttgcccgccacctttgcattgacttgtttgtt
gaaatgatggaacttaggttaaatagtagcgtacatattaaacacaaactgttccttacg
gctgtggagtacttgcctttcgctttggaaaatgagtccaaggcatgttttgaggatatt
gttgaaagagttctttcaagatctcgggaaactaaaactaacctatacgatgggaagtta
tctgacgtggcagagcagcatcggttacaatctcttcagaaggccatggctattcagtgg
ctttgctttacaccaccatctactattcccaattctcaaattataagtgcaaagcttctc
atgagggcattgatgcacagcaacatactgttcagagagtttgccttaatatctataggg
agagttcctaaaatgcctgtaggagcacatacattactcggcttcctagcagaacctttg
aagcagcctaaagaaactctattttcctctgaggacaatgaggtatctgagaatttgcag
gagtttaaagactggcaagagtattattcatgtgatgcaacctaccggaactggcttaaa
attgagatggaaaatgctgttgttcctcctgctaagctatcatcagaagagaaggataga
gcttttgctgctgctagagaaacattaagttcatctttgtcactattactaagagaagga
agtccatggttggtttcctcccagaatattatatatgattccacagagcatcattttctt
gagttgcatgctactgcaatgctccgcctaccttctggtgaatgtgttgccccagatgcg
accttatgtactgccttaacaagtgcgctctactctgcagtcagtgaagaagatgtgtta
aaacaccagttgatggtcaatgttgccatttcgtcaagagataattattgtgttgaagta
gtactccgttgcttagcgatgacagatgatgtgctagggctttatgcagttaatgatgga
ggtcttcttgccactgtcatggcagctggttttaaaggtgaactccatcggttccaaact
ggagtgacaatggatatttctcgtctagatgcttggtattcagatgagaatggttctgtg
gggaaccctgctacttacattgttaaagggctttgtcgaagatgctgtctaccagaaatc
atccttcgttgtatgcaggtgtcagtcttcctttctgaagctggtgattcacaagattat
tgtgatcaactattggatttagttgcttcatctgaaatgctgcaattgtttagtcagcac
cagttggaggaattcttattgtttgagagagatcgcttactatgtaaaatggagtttgag
gaagaactttctcttgattatcctgaataa

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