Typha angustifolia (narrow-leaf cattail): 140765664
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Entry
140765664 CDS
T11061
Name
(RefSeq) transcription factor SPEECHLESS-like isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
140765664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140765664
Transcription factors [BR:
tang03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
140765664
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
ABM
Motif
Other DBs
NCBI-GeneID:
140765664
NCBI-ProteinID:
XP_072960954
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All DBs
Position
8:join(12725952..12726296,12726405..12726905,12727889..12727954)
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AA seq
303 aa
AA seq
DB search
MGGDGLSILFENPHFRPSNLSRPTSQDDLFTLLESWEDATPAHLGNKRTREIDHEPGEDD
GRQRKKTKCSASSERAVLGQHNKTTHIAVERSRRKQMNEHLVVLRSLMPNFYVKRGDQAS
IIGGVVDYIKELQQVLQSLEAKKQRKAYSEVLSPRGAASSSPRPPLSPKPLPLSPRLTTS
PISPRTPQQRSPYKPSMMLQSHLYPTMTTSLESSTSVDNSKSPLVDVKVKFSGSNVVLET
VSNRTAGQVVKMAAVLENLELEILHLSINTVDDTMMNCFTIKIGIECKISLEELVQEIQQ
TFS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagacggcctatcgatcctcttcgagaacccacattttagaccgtcaaatttg
agccgacccacctctcaagatgacctcttcaccctcttggaatcatgggaagatgccaca
cctgcacacctagggaacaagaggactcgtgagatcgatcatgagcccggcgaagacgat
ggccgacagcgaaagaagacaaagtgctcggcttcgtcggaacgagcggtgttagggcag
cacaacaagacgacacacatcgcggtggagcggagccggaggaagcaaatgaacgagcat
cttgtggtgctacgctcactgatgccaaacttttacgtcaaacgaggagatcaagcgtcc
atcataggaggagtagttgattacatcaaggagttgcaacaagttctacagtcattagag
gccaagaagcaaagaaaagcttatagcgaagtacttagcccaagaggtgcagcatcgagt
agtcctagaccaccactgagcccaaagccactacctttgagtccaagactgactacttcg
ccaattagcccaagaactccacagcaaaggagcccttacaagccaagtatgatgcttcaa
agtcacttgtatcccacaatgacaacttctcttgaatcctctacttccgtggataattcc
aagtcgccattagtagatgtgaaggtgaagttctctgggtcgaacgtcgtattggagacc
gtgtcgaatcgcaccgctggccaagttgtgaagatggctgctgttcttgaaaaccttgaa
ctggaaatacttcatctgagcatcaatactgttgatgatactatgatgaactgcttcacc
attaagataggaatagagtgcaaaattagtctggaagaactcgtacaagaaatccagcag
accttctcgtaa
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