Typha angustifolia (narrow-leaf cattail): 140767348
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Entry
140767348 CDS
T11061
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00906
Carotenoid biosynthesis
tang01100
Metabolic pathways
tang01110
Biosynthesis of secondary metabolites
Module
tang_M01040
Lutein biosynthesis, plants, lycopene => lutein
tang_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
140767348
Enzymes [BR:
tang01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
140767348
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
HI0933_like
NAD_binding_8
Pyr_redox_3
FAD_binding_2
Pyr_redox
FAD_binding_3
NAD_binding_9
Trp_halogenase
GIDA
3HCDH_N
XdhC_C
Motif
Other DBs
NCBI-GeneID:
140767348
NCBI-ProteinID:
XP_072963316
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Position
9:6512900..6514414
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AA seq
504 aa
AA seq
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MDTLLRTNNRIELLHPLHGLAEKHSLLPSLKLQTQDCRVSYGKNHQKWSRKVSARAGSSA
LLELVPETKKENLTFDLPLYDPSKGQVLDLAVVGGGPAGLAVAQQVSEAGLSVCCIDPSP
KLIWPNNYGVWVDEFEAMDLLDCLDATWSGAVVYVDELNTKLLGRPYGRVNRKQLKSKMM
QKCVSNGVRFHQAKVAKVVHEELKSFIICNDGVTIQATVVLDATGFSRCLVQYDKPYNPG
YQVAYGILAEVEEHPFDLDKMVFMDWRDSHLTANTALKEQNSRIPTFLYAMPFSSTRIFL
EETSLVARPGLAIEDIQERMVARLKHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGG
TAGMVHPSTGYMVARTLAAAPIVADSIVRFLGSDKGVSGNELSEAVWKDLWPIERRRQRE
FFCFGMDILLKLDLQATRRFFDAFFDLEPRYWHGFLSSRLFLPELVFFGLSLFSHASNMS
RLEIMAKGTLPLVNMINNLLREKN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatacccttcttagaaccaacaacaggattgaattgctccacccacttcacgggctt
gcagaaaagcacagccttttgccttccttgaagctccaaacccaggattgcagggtttct
tatggaaaaaatcaccagaaatggagtaggaaagtttctgctagagctggtagtagcgcg
cttctcgaattagttccagagaccaagaaagagaatctcacatttgatcttcccttatat
gacccatcaaaaggtcaggtgttggaccttgcagttgtcggtggcggccctgccgggctc
gccgttgcccagcaggtttctgaagcaggactctctgtctgctgcattgacccgtcgccg
aagcttatctggcccaacaattatggtgtttgggttgatgaatttgaagccatggacctc
ctcgactgcctcgatgcaacatggagtggtgcagtggtttacgtcgatgagcttaacacc
aagctccttggtcgcccttatgggcgtgtcaatcgcaagcagctcaaatcaaagatgatg
cagaaatgtgtctccaatggtgttcgttttcatcaggccaaggtagccaaagtggtgcac
gaagagttgaaatcatttataatttgtaatgatggggtcacaattcaggcaaccgttgtc
cttgatgctactgggttctctaggtgcctcgtgcagtatgataagccgtataatcctggg
taccaagtggcttatgggatcctggctgaagtagaagaacatccttttgatttggataaa
atggttttcatggactggcgagattcacatctcacagctaacacagcattgaaagagcaa
aacagtagaattcccacatttctatatgcgatgccattctcttcgacaagaatatttctg
gaagagacttcattagttgctcgtccaggtttggcaatagaagatatacaagaaagaatg
gtggccagactgaaacacttgggtataaaggttaaaagcattgaggaagatgagagatgc
gtgattccgatgggtggccctctcccggttcttcctcagagggttgttggaattggaggc
actgctggtatggttcatccatccacaggttacatggtagcaagaacgcttgcagccgct
cctatcgttgcggactcaattgttcgttttctaggttctgacaaaggcgtttcaggtaat
gaactgtctgaagcagtttggaaggatctgtggcctattgaaaggagaaggcaaagagag
ttcttctgcttcggtatggatatcctgcttaaacttgatttgcaagcgacaaggaggttt
tttgacgccttttttgatttagaacctcgctactggcatggatttctgtcatcaagattg
tttcttcctgagcttgtatttttcggactttctctcttctcgcatgcttcaaatatgtct
aggttagaaatcatggccaagggtactcttcctttagtaaatatgataaacaacttgcta
cgtgagaaaaattag
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