Typha angustifolia (narrow-leaf cattail): 140773529
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Entry
140773529 CDS
T11061
Name
(RefSeq) adagio-like protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
140773529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tang04121
]
140773529
Ubiquitin system [BR:
tang04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140773529
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
PAS_3
PAS
F-box-like
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
140773529
NCBI-ProteinID:
XP_072972236
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Position
13:complement(join(17543065..17544637,17545084..17545385))
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AA seq
624 aa
AA seq
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MSGGRGRSCGDRTPTKRFKFSADDQMELELGEREEEEEYQELEEEEEEDEEMGHGLFYYP
VRPSAFVVSDALEPDCPVIYVNTVFENATGYRADEVLGRNCRFLQFRDPRAQRRHPLVDP
MVVSEIRRCLEEGLEFHGEILNFRKDGTPLINSLRLMPIHGDDGIVTHIIGIQLFSEANI
DLNRLSYPVFKQKSYLKSTHQDLTDSTMYEQQQNCGMLQLSDEVLAHNILSRLTPRDVAS
IGSVSTRMRELTKNEHLRKVVCQNAWGREVTIKLELSTKKLGWGRLARELTTLEAATWKK
LTVDGRVEPSRCNFSACAVGNRLVLFGGEGINMQPMDDTFVLNLESAHPEWRRVKVASSP
PGRWGHTLSCLNGSWLVVFGGCGSHGLLNDVFVLDLDAHQPTWKEVTGLAPPLPRSWHSS
CTVDGSKLVVSGGCTDAGVLLSDTFLLDLTKEKPTWREIASEWAPPSRLGHTLSVYEKTK
VLMFGGLAKSGSLRLRSCDAYTIDLQDEEPQWRQLGMAGFPNVGPPPRLDHVAVSLPCGR
IIIFGGSIAGLHSPSQLFLLDPSEEKPTWRILNVPGQPPKFAWGHSTCVVAGTRVLVLGG
NTGEEWILNELHELCLASSPDADP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaggaagaggacgatcgtgcggtgaccggactccaactaagcggttcaagttc
tccgccgatgaccaaatggagctcgagcttggcgagagagaagaagaagaagaataccaa
gagcttgaggaggaggaagaagaagacgaagagatgggtcatggtctattctattatccg
gtgaggccgtcggcttttgtggtatcggatgctctcgaacccgattgcccggtcatttac
gtcaacaccgtcttcgagaacgccacgggttaccgcgccgatgaggtgctcggccggaac
tgccgattcttacagttccgggatccacgagcacaacgccggcaccccctcgtcgacccc
atggtcgtctcggagatacggcggtgcctcgaagaaggcctcgaattccacggcgagatt
ctcaactttcgcaaagacggcacccccttgatcaactcactaaggctaatgccgatacat
ggcgacgacggcatcgtgacccacatcataggcatccagctcttctccgaagccaacata
gatctcaaccgcctctcttacccagtcttcaaacaaaaatcctacctcaaatccactcac
caagatcttaccgactctactatgtatgaacagcagcagaactgtggaatgctgcaattg
tccgacgaagtcttagctcataacatcctgtcacgtctgaccccaagagacgtggcctcg
attggatcggtgtccactagaatgagggaattgaccaagaacgagcatttgaggaaggtt
gtttgtcaaaatgcctggggaagagaagttactattaaacttgagctaagtacgaagaag
ttaggctggggccggcttgcaagggagctgacgactctcgaggcggcgacgtggaagaag
ctcacggtcgacggcagagtcgagccgtctcgctgcaattttagtgcgtgcgccgtcggt
aaccggctagtgctcttcggcggcgaggggattaatatgcagccgatggacgatactttt
gtgctcaatctcgagtcggcgcacccggagtggcggcgcgtgaaggtggcctcgtctccg
ccggggcggtggggacacaccttgtcgtgcttgaatggctcatggctggttgtcttcggt
ggatgtgggagccatgggttgttgaacgatgtcttcgttttggatttagacgcgcatcag
ccgacctggaaggaagttaccgggttggctccgccgcttccaagatcctggcacagctcc
tgcaccgtcgacgggtcgaagctggtcgtgtccggcggttgcaccgacgccggcgtccta
ctcagcgacacgttcttgctcgatctgacaaaagagaagccaacgtggagggagatagcg
tcggagtgggcgccgccctcgcggctcggccacacgctctccgtctacgagaagacgaag
gttttaatgttcggcggcctggcaaagagcggctcgttgcggctgcggtcgtgcgacgcg
tacacgatcgacctgcaggacgaggagccgcagtggcgtcagctgggcatggccgggttc
cccaacgtcgggccgccgcctcgactcgaccatgtcgcggtgagcttgccgtgtgggagg
atcatcatcttcgggggatcgatcgccgggctgcactcgccgtcgcagctcttccttctt
gatccgtccgaggagaagccgacgtggaggatcctaaatgtgccaggccagcctcctaag
ttcgcatgggggcatagcacttgtgtggttgcggggactagagttctagtactgggtggt
aataccggggaggagtggattctgaatgagttgcatgagttgtgcttggcaagctccccg
gatgcagatccatga
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