Typha angustifolia (narrow-leaf cattail): 140774654
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Entry
140774654 CDS
T11061
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140774654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140774654
03012 Translation factors [BR:
tang03012
]
140774654
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
140774654
Translation factors [BR:
tang03012
]
Eukaryotic type
Release factors
140774654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
BMT5-like
She2p
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
140774654
NCBI-ProteinID:
XP_072973831
LinkDB
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Position
13:complement(7774676..7775989)
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AA seq
437 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKTLEMGAVETLIVWENLDINRYVLKNSVSGEIIIKHLNKEQEADQSNFRD
LAANAELEVQEKLSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDDGEVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggtcatgaaacagataagaatattgagatatggaaaatcaagaaattgatc
aaggcactggaatctgcaagaggtaatggcacaagcatgatctctctcataatgcctcca
cgtgatcaagtctctcgtgtcaccaagatgttaggtgatgaatatggtactgcttcaaat
atcaaaagtagggtcaataggcaatctgttttggcagccatcacctctgcccagcagagg
ctgaaactttataacaaggttcctcccaatggactcgttctctacactggaactattgtt
actgaagatggaaaagagaagaaggtcactattgattttgagcctttcaagcccattaat
gcatcgctttacctttgtgataacaagttccacactgaagctttgaatgagcttctggaa
tctgacgataagtttggtttcatagttatggatggaaatggaaccctttttggcacatta
agtggtaatacacgtgaggtgcttcataaattcactgttgatcttccaaagaagcatggg
agaggaggacaatcagcacttcgatttgcacggcttcggatggaaaagcgccataactat
gttcgaaagacggctgagctcgccacccaattcttcataaatccagccacaagtcagcct
aatgtatctggactaattcttgctggttctgctgattttaaaacagaattgagccagtca
gacatgtttgatcctcgtcttcaagcaaaaatacttaatgtggttgatgtttcttatggg
ggagagaatggttttaaccaagcaattgagttgtcagcagagattttatcaaacgtaaag
ttcatacaggaaaaacggttgatagggaagtattttgaagaaataagccaagacactggc
aaatatgtttttggtgtggatgacaccctaaagactcttgaaatgggtgctgttgagact
ttgattgtgtgggaaaatttggatatcaacagatatgtgctgaagaacagcgtttctgga
gaaattatcataaaacatttgaataaggagcaagaagcagaccagagtaactttcgtgat
ttagctgccaatgctgaattagaggtccaggagaagttgtctcttttggaatggtttgct
aatgaatacaaacgttttggctgcacacttgagtttgttaccaacaaatctcaagaggga
tcacagttctgcagaggatttggcggtattggtggtatattgcgctatcagcttgatatc
aggtcatttgacgagctgtctgatgatggggaagtgtacgaggactctgattag
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