Typha angustifolia (narrow-leaf cattail): 140775574
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Entry
140775574 CDS
T11061
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang00040
Pentose and glucuronate interconversions
tang01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140775574
Enzymes [BR:
tang01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140775574
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140775574
NCBI-ProteinID:
XP_072975054
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Position
14:complement(join(643070..643294,643428..643496,643585..643795,644350..644701,645578..645959))
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AA seq
412 aa
AA seq
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MQFFSNKYCGFTPRRILRSLPSSSIFFFLPLIGRMGGCFSWIRLKAREDRNPSYGYANPP
IPTFPDQIISYNGGDGVGLPEARSEMAGLPYAHVDVALRAVAGKAEGFGRHAIGGLHGSV
YHVTTLADDGCGSLREGCRKKEPLWIVFEVSGTIHLSSYLRVSSYKTIDGRGQRIKLTGK
GLQLRECEHIIICNLEFEGGRGHDVDGIQIKPKSRHIWIDRCSLRDYDDGLIDITRESTD
ITVSRCHFLMHDKTMLIGADSSHIGDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYT
RNWGIYAVCASVEAQILSQCNIYEAGQKKAVFKYMPEKAADREEVTAGWIRSEGDLFLNG
AQPCLTDGGGVDRVFKAEEHYQGWTIEPASAALKEVIQLSAGWQPLSRPPDC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttctctaacaaatattgtggattcactccccggcgaattctccggtctctt
ccctcctcttccatctttttttttttaccgcttattggtcgaatgggaggttgcttctcg
tggatccgattgaaagcgcgcgaggatcggaatccctcctacggttacgctaatccccca
attcctacatttccggatcaaataatctcctataacggcggggacggcgtggggttaccg
gaggcgaggtcggagatggcggggctgccttacgcccacgtggacgtggcgttgcgtgcc
gtcgccggcaaagctgaggggttcggccgacacgctattggtgggctccacggatccgtg
tatcacgttactacactcgcggatgatggatgtggctcactccgtgagggatgtcgcaaa
aaggaaccgctttggattgtctttgaagtttcaggaactatccatctctcatcatacttg
agggtatcatcgtataagactatagatggtcggggacagagaattaaattgacaggtaaa
ggtttacaattgagagagtgtgaacatatcattatatgcaacttggaatttgaaggtggt
agaggacacgatgtcgatggtattcaaataaagcccaagtctaggcatatatggatagac
cgttgcagtctgcgtgattatgatgatggactaattgatatcacccgagaaagtactgat
atcactgtctcaaggtgtcacttcttaatgcatgacaaaacaatgcttattggagcagat
agcagccacattggtgatagatgtataagggtgactattcatcactgttttttcgacgga
acacgacagcgtcatcctcggcttcgatttggcaaagttcacctctacaataattacaca
agaaattggggcatatatgctgtttgtgccagtgtggaagcacagattctctctcaatgc
aatatatatgaagcagggcagaaaaaggcggtattcaaatacatgcccgagaaggcagca
gatagagaagaggtaacagcaggatggataaggtccgaaggcgacttgttcctgaatggt
gcccagccatgtttaacagatggtggtggtgtcgaccgcgtcttcaaggccgaagagcac
taccaaggatggacaatcgaacccgcatcagcagcgctcaaagaagttattcagctctct
gcaggatggcagcccttgtcgcggccacctgattgttga
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