Typha angustifolia (narrow-leaf cattail): 140776729
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Entry
140776729 CDS
T11061
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140776729
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tang01009
]
140776729
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tang03021
]
140776729
03019 Messenger RNA biogenesis [BR:
tang03019
]
140776729
03041 Spliceosome [BR:
tang03041
]
140776729
Enzymes [BR:
tang01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
140776729
Protein phosphatases and associated proteins [BR:
tang01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
140776729
Transcription machinery [BR:
tang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140776729
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140776729
Spliceosome [BR:
tang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140776729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
140776729
NCBI-ProteinID:
XP_072976651
LinkDB
All DBs
Position
14:join(193434..193611,194740..195299,195374..195565)
Genome browser
AA seq
309 aa
AA seq
DB search
MVPDLLDDIIRRLLDVRKTRPGKQVQLSESEIRKLCVVSREIFLSQPTLLELEAPIKICG
DIHGQYSDLLRLFEYGRFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG
NHECASINRIYGFYDECKRRFNVTLWKVFTDCFNCLPVAALIDDKILCMHGGLSPDLSNL
DQIRSLTRPTDVPDTGLLCDLLWSDPSRDFQGWGMNDRGVSYTFGSDEVSEFLLKHDLDL
ICRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNSGAMMSVDETLMCSFQILKPAEKRT
KFIMSTKME
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggttccggatttgctcgacgacatcatccggcggctgcttgacgtcaggaagacgagg
ccggggaaacaagtccagctctcggagtcggagatccgaaagctatgcgtcgtctcccgc
gagatcttcctaagtcagcccactctcttggaactcgaagcccctatcaagatatgtggt
gatatccacggccagtacagtgatcttttgaggctatttgaatatggacgttttcctcca
gaggcaaattatttatttctaggtgattatgtggatcgaggaaagcaaagcttggagaca
atatgccttcttcttgcatacaaaatcaagtacccagagaatttttttcttctgagagga
aatcatgaatgtgcctctataaacaggatatatggattttacgatgaatgcaagcgcagg
tttaacgtgacactgtggaaagtttttactgactgttttaactgtctccctgtagctgct
ctaattgatgacaagatattatgcatgcatggtggtctttctcctgatctgtcaaacctg
gatcaaataagaagtttaactcgtccaactgatgtaccagatactggtttactatgtgac
ttactttggtcagatcctagtagagactttcaaggttggggaatgaatgatagaggcgtt
tcatacacctttggttcagacgaggtttctgaattcctgttaaagcatgacctggatctc
atctgtcgcgcccaccaggttgttgaagatggctatgaattctttgcggaaagacaactc
gtcaccatattttcagccccaaattactgtggtgaatttgataattctggtgcaatgatg
agtgtggatgagactttaatgtgctcttttcaaattctcaaacctgctgagaaaaggaca
aagttcatcatgtcaacaaaaatggaatga
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