Typha angustifolia (narrow-leaf cattail): 140777631
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Entry
140777631 CDS
T11061
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140777631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tang03019
]
140777631
03016 Transfer RNA biogenesis [BR:
tang03016
]
140777631
03012 Translation factors [BR:
tang03012
]
140777631
04131 Membrane trafficking [BR:
tang04131
]
140777631
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tang04147
]
140777631
Messenger RNA biogenesis [BR:
tang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
140777631
Transfer RNA biogenesis [BR:
tang03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
140777631
Translation factors [BR:
tang03012
]
Eukaryotic type
Elongation factors
140777631
Membrane trafficking [BR:
tang04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
140777631
Exosome [BR:
tang04147
]
Exosomal proteins
Proteins found in most exosomes
140777631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
AAA_22
FlpD
Motif
Other DBs
NCBI-GeneID:
140777631
NCBI-ProteinID:
XP_072977966
LinkDB
All DBs
Position
15:join(20312303..20312764,20312867..20313748)
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AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAQKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaatattgtggttattggtcatgttgactctgggaag
tctaccaccaccggtcatctcatctacaaacttgggggtattgataagcgagtgattgag
aggtttgagaaggaagcagctgagatgaacaagaggtcattcaagtacgcttgggtgctt
gacaaactgaaggctgaacgagaacgtggcattaccattgatattgctctctggaagttt
gagaccacgaaatactactgcactgttattgatgctcctggccatcgtgattttatcaag
aacatgatcactggaacttctcaggctgactgtgccgtcctcatcattgactccacgact
ggtggttttgaagctggaatttccaaggatggacagactcgtgaacatgctcttcttgcc
ttcactctaggagtaaaacagatgatatgctgctgtaacaagatggatgccaccacaccc
aagtactcaaaggcaaggtatgatgaaatcgtgaaggaagtctcatcttaccttaagaag
gttggctacaaccctgacaagatcccctttgtgccaatctctgggtttgaaggtgataac
atgattgagagatcgaccaaccttgactggtacaagggccctactctgttggaagctttg
gacttgatccaagagcccaagcgtcctacagacaagccccttcgccttcccctgcaagat
gtttataagattggaggtattggtaccgtacctgttggccgtgttgagactggagtcctc
aagcctggcatggtcgtcacttttggtcctactggcctcacaactgaagtcaagtctgtt
gagatgcatcatgaggctctccaggaggcccttcctggtgataatgttgggttcaacgtg
aagaatgtcgccgtaaaagatttaaagcgtggctttgttgcctccaactccaaggatgac
cctgctaagggggctgcgagtttcacctcacaagttatcatcatgaaccaccctggtcaa
attggcaatggctatgctccagtgcttgattgccacacatctcacattgcagtcaagttt
gctgagatcctaaccaagatagataggcggtctggcaaagaacttgagaaggaaccaaag
ttcttgaagaatggagatgcagggtttgtgaaaatgatcccgactaagcctatggttgtg
gagactttctctgagtacccaccattgggtaggtttgctgtcagagacatgaggcagacg
gtcgccgtgggtgtcatcaagagtgttgacaagaaggatcctactggagccaaggttacc
aaagcagctcagaagaagaaatga
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