Typha angustifolia (narrow-leaf cattail): 140779167
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Entry
140779167 CDS
T11061
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
140779167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tang03000
]
140779167
Transcription factors [BR:
tang03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
140779167
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
140779167
NCBI-ProteinID:
XP_072980252
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All DBs
Position
15:join(17810957..17811355,17811463..17811978,17812685..17812750)
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AA seq
326 aa
AA seq
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MGDNLQDLFEDPDFGTQEDLFRILETLDDATFNPLEATVFSPRCGGDTAKRLASQGSVSP
SVRLREIDETDEEDARPRKKFKYSAPAVASEEAASQDGPQKMSHIAVERNRRKQMNEHLS
VLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKVYSEVLSPRPASSPRP
LPLSPRPPPKSPRIGLPISPRTPQPGSPYKPRMQHSYMPSTIAASHESTPSLESSSTELA
ANSKTSVADVEVKFSGPNVLLKTVSHRIPGQATKIIAALESLSLEIIHVSMSTIDDTMMN
SFTIKIGIECELSAEELVQEIQQTFS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaacctacaagatctctttgaggacccggactttgggacccaagaggacctg
tttaggatcttggagacattggatgatgctactttcaatcctcttgaggcgactgtcttt
agccctagatgcggcggcgataccgcgaagagattggcgtcccaaggatcggtttctcct
agcgttaggttgcgggagatcgatgagaccgacgaagaggatgcgcgtcctcgaaagaag
tttaagtactcggcgccggcagtggcttcggaggaagccgccagccaagacgggccgcag
aagatgtcgcacattgcggtggagcgcaaccggaggaagcagatgaacgagcacttgtcg
gtgctccgatcgttgatgccgtgcttctacgtgaagagaggagaccaagcatccatcata
ggaggagtggttgattacatcaaggagttgcaacaagtattgcagtcactggaggccaag
aagcaaaggaaagtttacagtgaagtgcttagtccaaggccagcctcaagccctcggcca
ttaccactgagcccaagaccgccacctaaaagtcctagaataggtttaccgataagccca
cgaactcctcagcctggaagtccttacaagcctaggatgcagcacagctacatgccttcc
accatagcagcttctcacgagtccaccccctcattggagagtagctccaccgagctcgcc
gccaactccaagacctcggtggcggatgtcgaggtgaagttttcgggccccaacgttctc
ttgaagacagtatctcatcgcatacctggacaagctaccaagataatcgcggcgcttgag
agcctttcgctcgaaataatccatgttagcatgagcaccattgatgataccatgatgaac
tctttcaccatcaagatcggcattgagtgcgaacttagtgcagaagaacttgtacaagaa
attcagcaaacattctcctaa
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