Thiomicrospira aerophila: THIAE_00385
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Entry
THIAE_00385 CDS
T03589
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tao
Thiomicrospira aerophila
Pathway
tao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
THIAE_00385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tao03400
]
THIAE_00385
Enzymes [BR:
tao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
THIAE_00385
DNA repair and recombination proteins [BR:
tao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
THIAE_00385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
F_bP_aldolase
Motif
Other DBs
NCBI-ProteinID:
AHF00404
UniProt:
W0DTS8
LinkDB
All DBs
Position
complement(93297..94124)
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AA seq
275 aa
AA seq
DB search
MLKVVSFNVNSVRMRQHQLEALVAEQAPDIIGLQETKVQDHEFPLEAIEALGYRAEFCGQ
KTHYGVAMLYKPHLTLTKLQKGWLTDDDSAQKRMIIGDFTTPAGDNLRVINGYFPQGENR
EHPIKFPAKLAFYADLMAYLNTDCSPEQNLIVMGDFNISPQDIDIGIGEANRLRWLKTGK
TSFLPEERELWQNLLNWGLQDTYRCCHPDSNDKFSWFDYRSKGFEDSPKRGLRIDTLLAT
APLAAKVVASDIGYSIRSLEKPSDHAPVWSDFDLN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaagtcgtctcatttaatgtcaacagtgtgcggatgcgccaacatcaactcgaa
gcgctagttgcagaacaagcgccagatataattggtctgcaagaaaccaaagtgcaagac
catgaatttccactcgaggccattgaagctctaggctaccgtgccgaattttgtggccaa
aaaacccactatggtgtcgcgatgctatataaaccgcacctcaccctgaccaagctacaa
aaaggctggctaaccgatgatgacagcgcccaaaaacggatgattattggcgactttacc
acgccagcaggtgacaacctgcgcgtcattaacggctattttccacagggtgaaaaccgc
gaacatccgattaagtttcccgccaaactggctttctatgctgatttaatggcgtactta
aacaccgattgctcacccgagcaaaacctgattgtgatgggcgattttaatatttcaccg
caagacatagacattggcatcggcgaagctaatcgtttgcgctggctaaaaaccggcaaa
actagttttttaccagaagaacgcgaattatggcaaaacctactaaactggggcttgcaa
gatacttatcgttgctgccaccctgattcaaacgacaagtttagctggtttgactaccgc
tccaaaggctttgaagattcacctaaacgtgggctgcgcattgacacgctattagccacc
gcacccttagccgccaaagtggtcgccagcgatattggctatagcattcgcagccttgaa
aaaccctctgaccatgcgccagtttggtcggattttgaccttaattaa
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