Thermospira aquatica: KDW03_02635
Help
Entry
KDW03_02635 CDS
T08758
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
taqu
Thermospira aquatica
Pathway
taqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
taqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDW03_02635 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
taqu03021
]
KDW03_02635 (rpoB)
03400 DNA repair and recombination proteins [BR:
taqu03400
]
KDW03_02635 (rpoB)
Enzymes [BR:
taqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KDW03_02635 (rpoB)
Transcription machinery [BR:
taqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KDW03_02635 (rpoB)
DNA repair and recombination proteins [BR:
taqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KDW03_02635 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
URA10719
UniProt:
A0AAX3BF62
LinkDB
All DBs
Position
complement(532973..536527)
Genome browser
AA seq
1184 aa
AA seq
DB search
MPIKPQRVSFSRKKEWIDLPDLLEIQLKAYEDFLQAGVEPEKREKKGLELVFRTFFPIEL
SSQGRKGGDPDIVIDYVRYDLESPRYTESECFDKNLSYAVPLKAVFRVINRKTGEIKEKD
IYIGDFPLMTPRGTFIINGAERVVINQIYKSPGVLFAYKNKEYSSKIVPEKGAWLEFILD
KRKDLMYVRVDARRKILVSVFLRALGMSTQEIVSAFFKTRKLDLTKVEKSEAITKLVGKY
LAEDVVDSENNVILGAVEKLTPNYVNLLYQKGIQFISVIDPRSALENRPFLLTLEKDDTK
DNYQKAIKKVYSVLHPGEAASLEAIVKELQNMLFHRKFYDLGEVGRYKMVLKLYPELSPE
EKQALVEQRTLSFEDIIRTLQHLLKVAAQKEPLDDVDHLGNRRVRNVNELLVNQLIQAFT
KVERAIHEKFLSRDNEDISPQSLIAIKPIVSAINDFFGMSQLSQFMDQTNPLSELTHKRR
LSALGPGGLSRDRAGFEVRDVHNTHYGRVCPIETPEGPNIGLIASLSTYARVNAYGFIET
PYVVVKDGKITGEVHYLSATEEEVFYIAQANTKLTDSLMIQEEVVEARYKGEFMLVEREK
IQYMDISPKQILSVSAALIPFIEHDDANRALMGSNMQRQAVPLLNMSRPIVGTGMEYYVA
RDSRAIVMSTVDGTVKKVDSTKIIVEDNQGNKHEYPLLKFRRTNQDTTYNQKPVVNAGDK
VKVGDLLADGFATKDGELALGKNVVVAFMPWNGYNYEDAVLISERLLKDDEFSSIYMTVL
ECKAVETKLGSESITIEIPNVGEDALRNLDENGIVRVGAYVKPGDILVGKVTPKNEPNET
PEFRLLHAIFGEKAKDVKDTSLRVPNGESGVVVDVKVFSAENKDDLAPGVLKMVKVYLAK
KRKIKPGDKVAGRHGNKGVISRVLPEEDMPFLPDGTPVDVVLNPLGVPSRMNIGQLFETI
LGLAGLKLHKYYECGVFEGASLEDIEREIEEANAKIREDLYRERKQYGETDEEIERYFDQ
VKLPKSGKFMLRNGLTGEYFENPVFVGVMYMLKLHHMVDDKIHARSVGPYALVTQQPLRG
KANFGGQRLGEMEVWALEAYGAANLLQEMLTIKSDDTEGRVKAYEGIIKAKYLNYMGVPE
SFNVLVQELKGLALDVRVYDQKGQRVYLNEREREINDATKFHLV
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgccgataaagccacagagggtgagtttttccagaaaaaaagagtggattgatcttcct
gatttgctggagattcaactcaaggcctatgaggatttcttacaggccggagtcgagcct
gaaaagcgagaaaagaagggtttggagttagtttttcggacatttttcccaatcgagtta
tcttcccagggacggaaaggtggtgatccggatattgttattgattatgtgcgatatgat
cttgagtctcctcgttacactgaaagtgaatgttttgacaaaaacctttcgtatgcggtt
ccgctcaaggctgttttccgggtgattaatcggaaaacgggagagattaaagaaaaggat
atttatattggtgattttcctctgatgacacctcgagggacttttatcatcaatggtgct
gaaagggttgttatcaatcagatctataagtctccaggtgttctttttgcatacaaaaac
aaggaatactcttcaaagatcgttccagaaaagggtgcatggcttgagtttattcttgat
aaacgtaaagatctcatgtatgttcgtgttgacgcgaggagaaagattcttgtctctgtt
tttctgcgtgctctcgggatgtctacccaggagattgtcagcgccttttttaagactcga
aaactggatctgaccaaggttgagaaaagtgaagctattaccaaactggttggaaagtat
cttgctgaagatgttgttgacagtgaaaacaatgtgattcttggggctgtggaaaagtta
acaccgaactatgtgaaccttctgtaccaaaaaggtatccagtttatctcggtgattgat
ccacgatcagctcttgagaatcgaccttttcttctcactctggaaaaggatgacaccaag
gataactaccagaaggctatcaaaaaggtttactccgtgcttcaccctggagaagcagct
tctctggaagctattgtgaaagaattgcagaacatgcttttccatcgtaagttttatgat
ctgggtgaggttgggcgatataaaatggtgctcaagttgtacccggaactctctcctgaa
gagaaacaggctctggtggaacagcgaaccctttcttttgaggatattatcagaactctc
cagcatctattaaaggttgctgctcagaaggaaccgctcgatgatgttgatcatcttggc
aatcgtcgtgtgcgaaatgtaaatgaattgctggtaaatcagttgatccaggcttttacg
aaagtggaaagggccatccatgaaaagtttctcagtcgtgataatgaggatatctctcct
cagagtcttattgctatcaagccaattgtttcagcgataaacgatttctttgggatgagt
cagctctcacagtttatggatcaaacgaatcctctgtctgaattgacacacaagcgacgt
ctctctgcgcttggacccgggggactgtctcgtgatcgtgcaggatttgaggtacgtgac
gtccacaacacgcattatggtcgagtgtgtcctattgagactcctgaaggtccaaatatt
ggtcttatcgcctctctttctacgtacgcgcgagtgaatgcgtatggttttattgagact
ccttatgtggtggtgaaggatggaaagattacgggagaggttcattatctctcggcaaca
gaagaagaggttttctatattgctcaggcgaacaccaaacttacagattctctgatgatt
caggaagaggtggtggaagcccgttataagggagaatttatgttagtggagagagaaaag
atccagtacatggatatttctcccaagcagattctctctgtgtcggcagctttgattccg
tttattgaacatgatgatgctaaccgtgctctcatgggatcgaacatgcagcgtcaggct
gttcctcttttgaacatgagcaggccaattgtggggacgggtatggagtactatgtggcc
cgtgattcacgagctattgtgatgagtacggtagatggtactgtcaaaaaggtggactcc
accaagatcatagtggaggacaaccaggggaataagcatgagtatcccttgctcaaattc
cgcaggactaaccaggatactacctacaaccaaaaacccgttgtgaatgccggggataag
gtgaaggtgggcgatcttctggctgatggttttgcgacaaaggatggcgagctggcttta
ggaaaaaatgttgttgtggcctttatgccatggaatggctacaactatgaggatgctgtg
cttatcagtgaaaggcttctcaaagatgatgagttttcttcgatttatatgacggttctc
gagtgtaaggccgtagaaacaaagcttgggagtgaatcgatcactatcgagattccgaat
gtgggtgaggatgctttgcgaaaccttgatgagaatggtattgtccgtgttggggcgtat
gtgaagcccggtgatattcttgtgggtaaagtaactcccaagaatgagccgaatgagacg
ccggaatttcgattgcttcatgctatctttggagagaaggccaaggatgtgaaggatact
tctcttcgtgtgccgaatggtgagagtggggttgtggtcgatgttaaggttttctccgcg
gagaacaaggatgatcttgctcccggtgttctcaagatggtgaaggtttatctcgcgaaa
aagcgaaagattaaacccggtgataaggtggcaggtcgtcacggtaacaaaggtgtgatt
tctcgggtactgccggaagaggatatgcctttcctgcctgatggaacgcccgtagatgtg
gtattgaacccacttggtgtgccgagccgtatgaatattggacagctgtttgagaccatt
ttagggcttgctggtttgaagcttcacaagtattatgaatgtggagtgttcgaaggagct
tctctggaagacattgaacgcgagattgaagaggcgaatgctaaaattcgagaggatctg
tacagagaacgcaaacagtatggtgaaacagatgaagagatagagcgatactttgaccaa
gtgaagcttcctaagtcagggaaatttatgctccgtaatgggcttaccggggaatatttt
gagaaccctgtgtttgttggtgtgatgtacatgcttaaacttcatcacatggtggacgac
aagatccatgctcgttctgttggaccgtatgcgttggtgacccagcaaccacttcgtgga
aaggcaaattttggtggtcagcgtctcggagaaatggaggtctgggcattggaggcgtat
ggtgctgccaatctccttcaggaaatgttgacaatcaagtctgatgatactgaagggcgt
gtgaaggcgtatgagggtattatcaaggctaagtacttgaattatatgggagtccctgag
tcgtttaatgtgcttgtgcaggaattaaagggattggcactggatgtgcgtgtgtatgac
cagaaaggacagcgtgtctatctgaatgagcgtgagcgagaaattaatgatgcaacgaaa
ttccaccttgtataa
DBGET
integrated database retrieval system
